PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026421005.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 447aa    MW: 49552.6 Da    PI: 7.0158
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026421005.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS269.31.3e-82444372373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsets..eknsseelaalkl..fsevsPilk 92 
                     ++lL +cA a++++d +la+ +++ l++ as+ gdp+qRl++ f++AL +r +r ++++   +p  + +  ++nss+ l++++l  ++++ P++ 
  XP_026421005.1  44 EKLLHQCASALENNDVTLAH-MMWVLNNVASSIGDPNQRLTSWFLRALISRASRVCPSTTINFPDGTPAtlQRNSSRPLSMTELagYVDTIPWHI 137
                     689**************996.89*******************************99998877754443301445888899999899********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl... 181
                     f++ + N+ Il+a++g+++vHi+Df+i++++QWp+L++aLa+Rp+gpp lRi + +   ++    + + e +g rL++fA++ +++f+f+vl   
  XP_026421005.1 138 FGFCASNHSILKAIQGHKKVHILDFSITHCVQWPTLIDALAKRPGGPPALRISVPSLRPPVpplVNVSSEDVGLRLENFAKSRDITFSFSVLggs 232
                     *****************************************************98876666789999**************************** PP

            GRAS 182 ...........vakrledleleeLrvkpgEalaVnlvlqlhrllde....svsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleal 261
                                +++ ++ l++ +L++k +Eal+Vn++  l +l+de    +++ +s r+++L+++++++P++v+vv+++ad++++s+  r++ ++
  XP_026421005.1 233 sskssthvhfdLERLMNHLNPTSLELKDDEALVVNCQNWLRYLPDElqgnTQQAPSFRNRFLEIIRGINPHIVIVVDEDADLDTSSLKSRITASF 327
                     *999998766555667788************************9873222444455899************************************ PP

            GRAS 262 eyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesg 356
                     +y + lfd+le+ lp++s +r+ +E+  +g +i+n++  eg +r+er e+  +  er+++a F ++p+ e++ k++k+l+++++  g+  ++ ++
  XP_026421005.1 328 NYLWILFDALETLLPKDSCQRSEYEAD-IGHKIENIIGFEGLQRIERLESGIRLVERMKRAKFISIPICEETSKEVKYLINEHA-SGWGTKKVDE 420
                     ***************************.********************************************************.899******* PP

            GRAS 357 slvlgWkdrpLvsvSaW 373
                      lvl+Wk+++ v+++ W
  XP_026421005.1 421 MLVLTWKGHNSVFATTW 437
                     ***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    
MKTELRSSTS PVSLSKPSVF DTSQSSLPGA LNGCLGTPDG ACIEKLLHQC ASALENNDVT  60
LAHMMWVLNN VASSIGDPNQ RLTSWFLRAL ISRASRVCPS TTINFPDGTP ATLQRNSSRP  120
LSMTELAGYV DTIPWHIFGF CASNHSILKA IQGHKKVHIL DFSITHCVQW PTLIDALAKR  180
PGGPPALRIS VPSLRPPVPP LVNVSSEDVG LRLENFAKSR DITFSFSVLG GSSSKSSTHV  240
HFDLERLMNH LNPTSLELKD DEALVVNCQN WLRYLPDELQ GNTQQAPSFR NRFLEIIRGI  300
NPHIVIVVDE DADLDTSSLK SRITASFNYL WILFDALETL LPKDSCQRSE YEADIGHKIE  360
NIIGFEGLQR IERLESGIRL VERMKRAKFI SIPICEETSK EVKYLINEHA SGWGTKKVDE  420
MLVLTWKGHN SVFATTWVPF GSGPSGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-102GRAS family protein