PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026420645.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 363aa    MW: 41093.3 Da    PI: 6.5821
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026420645.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027308330123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C k+Fs+   L  H r+H
  XP_026420645.1 308 HECPICFKVFSSGQALGGHKRSH 330
                     79******************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MEEIQENNFF CKFCYKSFPC GRSLGGHMRS HIKKTKEYKI LPSSSSSIVL DDGNRNGSTF  60
MVETAEPSAG VYELRENPKK SWRLSDLSDD KALLGDEGEE DSWTTIDNEA AVPDHLLKKR  120
KRTARYDSTT SSSSSFSLVN DYSNLEIEQE QEEVAICLMM LSRDVGYWGG LDSVVESSGN  180
NFGFKKVESQ DSVDGFYKKD DFKKLTKNHT KVVFKVFDDY VELGKYQCTT CNKIFHSYQA  240
LGGHKSRQTK LKSCFSSKIE SSYETRMETE VSHHSTAAES EPTKPFILDI PVVKERKLSC  300
IVKKGEKHEC PICFKVFSSG QALGGHKRSH LVKTVEIQTT TIPQQQPEMN DLLNLYLPAP  360
IEE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1118123KKRKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.14e-28C2H2 family protein