PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420373.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 458aa MW: 50432.6 Da PI: 5.9786

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25	3.3e-08	381	421	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_026420373.1 381 ARQRRERISDRIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 421 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MDSLGWDIHM FGRMSPNVHP SLWSNNDIHR HEVGESFAAS EYYTNTGGKM ADLAEDFLAL 60 SPIFQGVKTC NANRSNWNNI NVVSHSNQIQ KEDAKRLEPA DMVLAESGES LVSQLFTSTS 120 SRMINKPNVM NPLTALMEDY GSSSAHDRLQ VGNGGGCGSA KHEAGFSTVE SVESLDCLLS 180 TTTNSNTSAS VENDGISLIF SADCNNNLWN HVSSGESENS NGSKEYNNCD QAVSQASSIP 240 CTATTNNNAV RPSLDTRPNS SKSSRREQQQ QQVSMNNNSH SFELVHSDSA TTQGGFRLIT 300 DNQPKTKKPR SEKTSNINFQ NQPDDASLPS FDEPDMEAIA YMKEMIYRAA AFRPVNLGLE 360 LVDKPKRKNV KISSDPQTVA ARQRRERISD RIRVLQKLVP GGSKMDTASM LDEAANYLKF 420 LRDQVKALET LGGGNNNSSP LQDNQNFPMQ NYFPFAKH

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MDSLGWDIHM FGRMSPNVHP SLWSNNDIHR HEVGESFAAS EYYTNTGGKM ADLAEDFLAL  60
SPIFQGVKTC NANRSNWNNI NVVSHSNQIQ KEDAKRLEPA DMVLAESGES LVSQLFTSTS  120
SRMINKPNVM NPLTALMEDY GSSSAHDRLQ VGNGGGCGSA KHEAGFSTVE SVESLDCLLS  180
TTTNSNTSAS VENDGISLIF SADCNNNLWN HVSSGESENS NGSKEYNNCD QAVSQASSIP  240
CTATTNNNAV RPSLDTRPNS SKSSRREQQQ QQVSMNNNSH SFELVHSDSA TTQGGFRLIT  300
DNQPKTKKPR SEKTSNINFQ NQPDDASLPS FDEPDMEAIA YMKEMIYRAA AFRPVNLGLE  360
LVDKPKRKNV KISSDPQTVA ARQRRERISD RIRVLQKLVP GGSKMDTASM LDEAANYLKF  420
LRDQVKALET LGGGNNNSSP LQDNQNFPMQ NYFPFAKH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	382	387	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	5e-57	bHLH family protein