PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026420271.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 369aa MW: 41395.7 Da PI: 4.3486

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026420271.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.5	2.7e-19	7	156	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvka..eekewyfFskrdkkyatgkrknratks 80 ppG+rF+P+d+ ++++yL +k+eg++l+ +++ ++++iy P+dL++ ++++yfF+k +k+ ++g+r +r++ + XP_026420271.1 7 PPGYRFKPSDKVIIKHYLIPKIEGRPLPSDHIYETTEIYGEAPQDLEEtfqegkkyysryayY--DenCDSSLYFFTKLKKRWENGSRISRTAGE 99 9**************************7777778******85578888777664321..12234477****************** PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy......kgrapkge........ktdWvmheyrl 128 g+W ke+++ + k+ + + ++r + +W m+ey++ XP_026420271.1 100 GTWTGDNGGKEIYRY-PPYKVEKRNFSLTenavksHKR----KnltltgdgYVTWNMEEYSV 156 99999*995.4444455555555222211111....11112222245799999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MSSKFAPPGY RFKPSDKVII KHYLIPKIEG RPLPSDHIYE TTEIYGEAPQ DLEETFQEGK 60 KYYSRYAYYD ENCDSSLYFF TKLKKRWENG SRISRTAGEG TWTGDNGGKE IYRYPPYKVE 120 KRNFSLTENA VKSHKRKNLT LTGDGYVTWN MEEYSVEKDD KVSDYVIVKI TRKKSNNKFL 180 KSSASQTASS CSNYEVTSSE VVSNNDFEVH DPVPEVSAVE ENQLPVDGQA EPEMNDAQFQ 240 DWFMNNTCIL LEDEGPVPVL QDAVRPTDQT QELQSCGDPV DCGVPNLDLF FHSDSLLSVV 300 QPVGAGSFGA IGGDNTAAPD HNQEGTKNIL GTISSEAAQP QNESWVISDE ELFSGLDNYD 360 LLPDLGVLF

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MSSKFAPPGY RFKPSDKVII KHYLIPKIEG RPLPSDHIYE TTEIYGEAPQ DLEETFQEGK  60
KYYSRYAYYD ENCDSSLYFF TKLKKRWENG SRISRTAGEG TWTGDNGGKE IYRYPPYKVE  120
KRNFSLTENA VKSHKRKNLT LTGDGYVTWN MEEYSVEKDD KVSDYVIVKI TRKKSNNKFL  180
KSSASQTASS CSNYEVTSSE VVSNNDFEVH DPVPEVSAVE ENQLPVDGQA EPEMNDAQFQ  240
DWFMNNTCIL LEDEGPVPVL QDAVRPTDQT QELQSCGDPV DCGVPNLDLF FHSDSLLSVV  300
QPVGAGSFGA IGGDNTAAPD HNQEGTKNIL GTISSEAAQP QNESWVISDE ELFSGLDNYD  360
LLPDLGVLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	4e-13	NAC family protein