PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29510.7 Da PI: 5.4867 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.5 | 9.8e-14 | 8 | 168 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............kvkaeek....ewyfFskrdkkyatgkrknratk 79 pGf F+P++e++ ++yLk+ +e++k + + i +++ ++ e +++ + ek +++fF+k ++ + t++r r++ XP_026419958.1 8 LPGFVFSPSNEDIFKCYLKPLIEDQKDDYLNPIYKTEELYGENVNIELtferalqnyrqyvN---AEKifddSLWFFTKLKR-HGTSNRFDRKAG 98 59************************888787777765555656655224566666664331...22234325577777766.57899******* PP NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfy....................kgrapkgektdWvmheyrl 128 g+W at + k+ ++ k++l+g +t++f ++++ ++++W+mhey+l XP_026419958.1 99 VGTWTATDQAKTKYEDkKESLKGKFRTFAFTvpdndglqgtkaptrkrisaSASKDLNNNANWIMHEYSL 168 *********998888635556777789999888887777766666554443345555679********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MEDSRMQLPG FVFSPSNEDI FKCYLKPLIE DQKDDYLNPI YKTEELYGEN VNIELTFERA 60 LQNYRQYVNA EKIFDDSLWF FTKLKRHGTS NRFDRKAGVG TWTATDQAKT KYEDKKESLK 120 GKFRTFAFTV PDNDGLQGTK APTRKRISAS ASKDLNNNAN WIMHEYSLEK DEKLYSDYVI 180 VKIRRKRNTS SCSQEVQNEA AVEVEDVRAT KTPHIANQYQ LTSSDGQHEI AAPPTQDDQQ 240 GEYNRDLDID SWKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 3e-08 | NAC family protein |