PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026419742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 189aa MW: 21650.3 Da PI: 4.4356 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 74 | 1.2e-23 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k+i++k +r+vtf+kRr+g++KKA EL+ L++a+v++i+fs++gkl+++ XP_026419742.1 9 KKIDDKKKRSVTFTKRRQGLFKKADELCNLTGADVSLIVFSPSGKLFTF 57 68**********************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MGKKKIEIKK IDDKKKRSVT FTKRRQGLFK KADELCNLTG ADVSLIVFSP SGKLFTFGCP 60 NSDEVLNRFP VQEDDGKMSS TSENGDGFWW NDIKIDELDT QEKVDAVREQ LLQVKNLVAK 120 RKEELLALST PSAEEKETTT GNIEDSCMFS VNEDDHSWFP TLTSDDMNEF DELLKDFYVD 180 QNMQQLPTY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 3 | 17 | KKKIEIKKIDDKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36590.1 | 1e-19 | M-type_MADS family protein |