PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418947.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 558aa MW: 61102.1 Da PI: 6.5961

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418947.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.5	8.1e-14	172	231	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ ++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_026418947.1 172 SIYRGVTKHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDREEKAARAYDLAALKYWG 231 57*****************666664477446***********************98 PP
2	AP2	47.1	6.1e-15	276	325	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_026418947.1 276 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 325 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGSMNNNWLS FPLSPVHSSL SHLHSSQNNQ FSLGLVTDGM DHSFENPADW NLMNAHGGGV 60 GDEVPKVADF LGVEKSDNHN DSLVFNQIPT PTQADYLLSN CNPQVTDISP SDGSAKDFKS 120 SQGNVGNLQS LTLSMGTGKG SNTTDEGNSA ITTTVVEEAP RRAIDTFGQR TSIYRGVTKH 180 RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDREEKAAR AYDLAALKYW GTSTTTNFPI 240 SIYEKELEEM KNMTRQEFVA SLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD 300 LYLGTFSTEE EAAEAYDIAA IKFRGLNAVT NFDMNRYDVK SILESNTLPI GGASKRLKET 360 QDTETLRKRE EIKAIGSSFY DGNSTVGGFQ GYPMVPPFEQ TSQPLLALQN QQSYHHYTQE 420 APHLQNYMQT HQLLHNPNST SSLLHSSQSG SQFHQGFYQN QPTMLHGLMT MGSSSSLMGS 480 NGSSSNGYDE AAYFGNGLGL TATSSSTGNA GAGIGSMTDL ALVKVDYDIN SGGYGGWPAE 540 TVHGNGANPG SFTMWNDN

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGSMNNNWLS FPLSPVHSSL SHLHSSQNNQ FSLGLVTDGM DHSFENPADW NLMNAHGGGV  60
GDEVPKVADF LGVEKSDNHN DSLVFNQIPT PTQADYLLSN CNPQVTDISP SDGSAKDFKS  120
SQGNVGNLQS LTLSMGTGKG SNTTDEGNSA ITTTVVEEAP RRAIDTFGQR TSIYRGVTKH  180
RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDREEKAAR AYDLAALKYW GTSTTTNFPI  240
SIYEKELEEM KNMTRQEFVA SLRRKSSGFS RGASMYRGVT RHHQHGRWQA RIGRVAGNKD  300
LYLGTFSTEE EAAEAYDIAA IKFRGLNAVT NFDMNRYDVK SILESNTLPI GGASKRLKET  360
QDTETLRKRE EIKAIGSSFY DGNSTVGGFQ GYPMVPPFEQ TSQPLLALQN QQSYHHYTQE  420
APHLQNYMQT HQLLHNPNST SSLLHSSQSG SQFHQGFYQN QPTMLHGLMT MGSSSSLMGS  480
NGSSSNGYDE AAYFGNGLGL TATSSSTGNA GAGIGSMTDL ALVKVDYDIN SGGYGGWPAE  540
TVHGNGANPG SFTMWNDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20840.1	1e-174	AP2 family protein