PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418870.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 351aa    MW: 39927.4 Da    PI: 4.6329
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.4e-09173214955
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ErrRR ++++ + +Lr l+P+      +K++Ka+i   Av Y+++Lq
  XP_026418870.1 173 ERRRRVQMKHNLYTLRALVPNI-----TKMDKASIIGDAVSYVQDLQ 214
                     9********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDISNLQPFQ QQTSNMHSND FDLHEFINHV SFEDFIDQVR EDFIEPIIDY GTNYYHDHGN  60
FHQQQQVDNE LMYFNDGARC NNNQLFPTPG DLFELINSYS AAGSTTTTTS DPVSANPNVA  120
APSFSSIDID AVLDEDEENE GDDYSSGTTS TRPSSSSSKR TSSVDNSRIL GTERRRRVQM  180
KHNLYTLRAL VPNITKMDKA SIIGDAVSYV QDLQKEAKRL KTEIAELEPT LTNQIEKYKN  240
LVENPEKNRT SDHNKEHQIC KKILKMDVFQ VEENEFYIRI VCNKGDGVAV CLYKALESLT  300
SFDVLSSKFA TFPDKLDFTF TLNVKECGGK MMNLSNMKLW LNEALLNQGF V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-60bHLH family protein