PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026418861.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 385aa    MW: 42313.9 Da    PI: 9.263
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026418861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.72.6e-10426225
                    -S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                    k elC +f+r G C++GdrC+F H
  XP_026418861.1  4 KKELCTHFLR-GSCRFGDRCNFLH 26
                    89********.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MNRKKELCTH FLRGSCRFGD RCNFLHANQQ QSKPNNPFGF GSQSSNTNQQ QQKPNPFGFG  60
TQSNSQLNVQ SDFGSKNQNQ FKPFDNKWNR SSSTASTNPA QPRKDDKQTQ LATHKCTDPE  120
LCKRQIAEDF QQERPLWKLT CYGHCKDRPC DIVGDISYEE IRAAAYDDAK RGLPLPSIVE  180
RERNLLKTKI LEFENLLRNP YVISNAVTAG PSSFPTTNLS APPLNVQTNV PPTVSSFSQL  240
GTSLGPILSK PAPPNMTFGQ PSVFHNPSQN MGGFGNSNSI FRNQGGQKSM QPFESGTSIS  300
KFNSGFGSRG NNPSTVPFPP TSQLPSSSSN QSPFTSSTSR SPVPSMLGQA SMKTGGVSVN  360
SSIWSKEEWT PGEIPEEAPP AEYIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.14e-75C3H family protein