PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418599.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 1608aa MW: 178947 Da PI: 6.049

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418599.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00073	1517	1540	2	23
EET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCp..dCgksFsrksnLkrHirtH 23 +C+ Cgk+Fs++ n H+r+H XP_026418599.1 1517 QCThkGCGKRFSSHKNVILHQRVH 1540 688889****************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1608 aa Download sequence
MSGVEIPNWL KKLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSKKYT 60 YSNLNKSLSK FPDLGSDFNS ALASSCSGSS SGDKNGDVKP VFTTRHQELG CSSKRSKGSV 120 RQSAIHKQVW QSGEVYTLEQ FETKSKVFAK NQLGTVKDVI PLTVETLFWK ASSEKPIYVE 180 YANDVPGSGF GEPDFPNRYF HKQRSKRKFS RNHRRNFGCE KREIDTEGNS NIGKDSASYM 240 KIDSDPSSEA CKQSPSSVSM LSDECQRLSK SRSSDAGSDK EGSAGWKLSN CPWNLQVIAR 300 SPGSLTRFML EDIPGVTSPM IYIGMLYSWF AWHVEDHELH SLNYLHTGSP KTWYAVPGDR 360 ADAFEETVCS QGYGGNIDRL AALTLLGEKT NLLSPEVVVA SGLPCCRLVQ YPGEFVVTFP 420 RAYHVGFSHG FNCGEAANFG TPQWLKVAKE AAVRRAAMDL LPMLSHQQLL YMLTMSFISR 480 VPSALLLPGA RSSRLRDRQK EERELLVKKA FIDDMVSESN LLLAFLGKES TSHVVTWDSE 540 LLPSTIKDSG SSPSPSTFSE SCLMVDGERD LDTHNLVDEN IVGSCDSPVG RTELSMETGE 600 GLYENDNELP CGLHVDPGAL ACVACGILGF PFMSIVQPSH CASEKLLRLA DSQMVQEGQE 660 LLRYVKLPFP IDLNHTIYNS SDTQGEEYQK EIVSLKHNDH ILMDTADHGR NFRSVDIDQD 720 TKGPPMHPRD NLDKQWSRVN GFLRPRIFCL EHGLEIEELL QSKGGADVLI ICHSAYQKIK 780 AHASAVAEEI GVSFNCKEVP LQSASQEDLK LINVAIDSEE HEEGGEDWTS RMGINLQYRV 840 KLKKLYPSKQ DNYALVLRGL PPDKSPNLDM SSLKWNSKKI RTPVMTTGLI HYRSCGDIQI 900 KEVKQVEISV RNKVIIDSDP IRSKSGKNLQ VKEDISFDIS ETDKVTVATS PNLSELCANK 960 HFEEDKAMIS SEGFSVSGET SIGQCDSCDN SLTKEEKPVE ILETGSNIQA KNSREYKLGD 1020 NTQIEEDQSV EESERSKAFR ENTIILYSRR ARNKKMGFPS QPNSWANVRP RARTDTPKES 1080 SAANETLDNK RIQSDGNLGD TGNSTVYGME LVKFPVMENC KLKSRDFTAT EISDISEASD 1140 PSKFTGFLIV EDVSIQLSGA QLDVASITED NRCVCKAPGD SRSSDIQGTA ILTNKSTETP 1200 SKNRNLEETD FEDKDFNCTV MDLSEIQQEA KTVAIESNQP MVMDIPETQH EGKTSADKSV 1260 VCNDACSTVA QKGPECAATK NSEMQLEAET SSPEPMVRHQ AMTMTKEKGS EDVIMDSLAV 1320 QHEDKINESN QPSSLVMLNP EHCHEDKVLT KESATCNQAN PFRLPKISVS VNGGSEVLQD 1380 IQDVDEAGVG CSAREDMDSE STHPKAADPE PAKREGNKRS RELDQITKDQ ISFDGFIRGP 1440 CEGLRPRSSR TTAVYQTNSD ISVPEEVVLK KSRTQVDNVI THSGKNEVVK EAFACNIERC 1500 RMRFKTKTQL VVHKQNQCTH KGCGKRFSSH KNVILHQRVH AEERPLKCSW EGCNMSFKWA 1560 WARTEHLRLH TGERPYECKV SGCGLTFRFV SDYSRHRRKT GHYVNSPP

Sequence ? help Back to Top

Protein Sequence Length: 1608 aa Download sequence

MSGVEIPNWL KKLPLAPEFY PTDTEFADPI AYISKIEKEA SAFGICKVIP PLPKPSKKYT  60
YSNLNKSLSK FPDLGSDFNS ALASSCSGSS SGDKNGDVKP VFTTRHQELG CSSKRSKGSV  120
RQSAIHKQVW QSGEVYTLEQ FETKSKVFAK NQLGTVKDVI PLTVETLFWK ASSEKPIYVE  180
YANDVPGSGF GEPDFPNRYF HKQRSKRKFS RNHRRNFGCE KREIDTEGNS NIGKDSASYM  240
KIDSDPSSEA CKQSPSSVSM LSDECQRLSK SRSSDAGSDK EGSAGWKLSN CPWNLQVIAR  300
SPGSLTRFML EDIPGVTSPM IYIGMLYSWF AWHVEDHELH SLNYLHTGSP KTWYAVPGDR  360
ADAFEETVCS QGYGGNIDRL AALTLLGEKT NLLSPEVVVA SGLPCCRLVQ YPGEFVVTFP  420
RAYHVGFSHG FNCGEAANFG TPQWLKVAKE AAVRRAAMDL LPMLSHQQLL YMLTMSFISR  480
VPSALLLPGA RSSRLRDRQK EERELLVKKA FIDDMVSESN LLLAFLGKES TSHVVTWDSE  540
LLPSTIKDSG SSPSPSTFSE SCLMVDGERD LDTHNLVDEN IVGSCDSPVG RTELSMETGE  600
GLYENDNELP CGLHVDPGAL ACVACGILGF PFMSIVQPSH CASEKLLRLA DSQMVQEGQE  660
LLRYVKLPFP IDLNHTIYNS SDTQGEEYQK EIVSLKHNDH ILMDTADHGR NFRSVDIDQD  720
TKGPPMHPRD NLDKQWSRVN GFLRPRIFCL EHGLEIEELL QSKGGADVLI ICHSAYQKIK  780
AHASAVAEEI GVSFNCKEVP LQSASQEDLK LINVAIDSEE HEEGGEDWTS RMGINLQYRV  840
KLKKLYPSKQ DNYALVLRGL PPDKSPNLDM SSLKWNSKKI RTPVMTTGLI HYRSCGDIQI  900
KEVKQVEISV RNKVIIDSDP IRSKSGKNLQ VKEDISFDIS ETDKVTVATS PNLSELCANK  960
HFEEDKAMIS SEGFSVSGET SIGQCDSCDN SLTKEEKPVE ILETGSNIQA KNSREYKLGD  1020
NTQIEEDQSV EESERSKAFR ENTIILYSRR ARNKKMGFPS QPNSWANVRP RARTDTPKES  1080
SAANETLDNK RIQSDGNLGD TGNSTVYGME LVKFPVMENC KLKSRDFTAT EISDISEASD  1140
PSKFTGFLIV EDVSIQLSGA QLDVASITED NRCVCKAPGD SRSSDIQGTA ILTNKSTETP  1200
SKNRNLEETD FEDKDFNCTV MDLSEIQQEA KTVAIESNQP MVMDIPETQH EGKTSADKSV  1260
VCNDACSTVA QKGPECAATK NSEMQLEAET SSPEPMVRHQ AMTMTKEKGS EDVIMDSLAV  1320
QHEDKINESN QPSSLVMLNP EHCHEDKVLT KESATCNQAN PFRLPKISVS VNGGSEVLQD  1380
IQDVDEAGVG CSAREDMDSE STHPKAADPE PAKREGNKRS RELDQITKDQ ISFDGFIRGP  1440
CEGLRPRSSR TTAVYQTNSD ISVPEEVVLK KSRTQVDNVI THSGKNEVVK EAFACNIERC  1500
RMRFKTKTQL VVHKQNQCTH KGCGKRFSSH KNVILHQRVH AEERPLKCSW EGCNMSFKWA  1560
WARTEHLRLH TGERPYECKV SGCGLTFRFV SDYSRHRRKT GHYVNSPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein