PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418423.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GATA

Protein Properties

Length: 481aa MW: 54224.2 Da PI: 7.4402

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.7	5.7e-17	412	445	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs+C ttkT++WR+gp g tLCnaCG++yr + XP_026418423.1 412 CSHCATTKTSQWREGPMGRGTLCNACGVRYRTGR 445 *******************************877 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MATDIREELR RMQNVILRLS AEVGGKNQKL GVMEKKLEDG SESLSRMTEE VDHLDQAYNE 60 EKRKTKRTML ENERLMRGLE TQRKEIEQQA KEIKKRDAQL DFKSKQILVL RMLNTATQAP 120 TKINTEQGKH EGVKNMSGAD KVQVQIAANG LHNELEEKEC GLDNELSRKQ TFVKKEHRSN 180 HDLQEAPKVS IEEVTKEDDE KSVEVLTDWS MKDFEDSGEE ECNSFEDMVP PIPPPESLVE 240 PCNDMPNNSS VISRVLPVPD DEIAELEWSS TFVEDSFSDG GISLDKDFCN NSKKVDSCRL 300 RRSNRVLVRK NSSSCSGGMT MPLSPGTAVL ECVGSKRPQS AIFSQQPTSN LTSLKSCNIN 360 VENQPMPNSY ISSESEYFAE SHPPYTPNVN GKEQKKMEKG KKKRKQQLPG KCSHCATTKT 420 SQWREGPMGR GTLCNACGVR YRTGRLFPEY RPKASPTFVA SIHSSHHKKV LEMRVKGTPA 480 V

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MATDIREELR RMQNVILRLS AEVGGKNQKL GVMEKKLEDG SESLSRMTEE VDHLDQAYNE  60
EKRKTKRTML ENERLMRGLE TQRKEIEQQA KEIKKRDAQL DFKSKQILVL RMLNTATQAP  120
TKINTEQGKH EGVKNMSGAD KVQVQIAANG LHNELEEKEC GLDNELSRKQ TFVKKEHRSN  180
HDLQEAPKVS IEEVTKEDDE KSVEVLTDWS MKDFEDSGEE ECNSFEDMVP PIPPPESLVE  240
PCNDMPNNSS VISRVLPVPD DEIAELEWSS TFVEDSFSDG GISLDKDFCN NSKKVDSCRL  300
RRSNRVLVRK NSSSCSGGMT MPLSPGTAVL ECVGSKRPQS AIFSQQPTSN LTSLKSCNIN  360
VENQPMPNSY ISSESEYFAE SHPPYTPNVN GKEQKKMEKG KKKRKQQLPG KCSHCATTKT  420
SQWREGPMGR GTLCNACGVR YRTGRLFPEY RPKASPTFVA SIHSSHHKKV LEMRVKGTPA  480
V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66320.2	6e-29	GATA family protein