PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418411.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 561aa MW: 61848.4 Da PI: 7.3738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.4e-09	363	410	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026418411.1 363 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 410 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MEKEKYFRGN SPPQLMDIQI GHHHHEQYGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS 60 NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN 120 SPPKLNLSMM DHQLRGNLAN SAQTHHQPLA PFPSDPGFAE RAARLSCFGT RTFGNLSSSS 180 PSQFGLNEPE LSASTYRSNN QNPSNGKLSR VSSSQSLKAT GSHQENNNNN ISNKDFSQLQ 240 DMILDNEMRS AADRRLSSRS TTPEKNAEFN QEDSSISEQI PEIGLKVGND HAASNGRKRK 300 AASKGKTKET RAIPSTKEIK NTKEDDNSEA KKSKSGDNDE KTKAEPPKDY IHVRARRGQA 360 TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL 420 STVNPRLDFN MEALLSKDIL HPRGGSFPHP NYPIDASVAA AFPYGHQPSQ HHVQNLQQQN 480 GITIGTENHC PLDAALRRNL GMQLPSLDGF CESAAQLGAF WEDDLQSVVQ MGFGGQNQGQ 540 ETRYHPQNSH GLPSTHMKVE L

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MEKEKYFRGN SPPQLMDIQI GHHHHEQYGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS  60
NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN  120
SPPKLNLSMM DHQLRGNLAN SAQTHHQPLA PFPSDPGFAE RAARLSCFGT RTFGNLSSSS  180
PSQFGLNEPE LSASTYRSNN QNPSNGKLSR VSSSQSLKAT GSHQENNNNN ISNKDFSQLQ  240
DMILDNEMRS AADRRLSSRS TTPEKNAEFN QEDSSISEQI PEIGLKVGND HAASNGRKRK  300
AASKGKTKET RAIPSTKEIK NTKEDDNSEA KKSKSGDNDE KTKAEPPKDY IHVRARRGQA  360
TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL  420
STVNPRLDFN MEALLSKDIL HPRGGSFPHP NYPIDASVAA AFPYGHQPSQ HHVQNLQQQN  480
GITIGTENHC PLDAALRRNL GMQLPSLDGF CESAAQLGAF WEDDLQSVVQ MGFGGQNQGQ  540
ETRYHPQNSH GLPSTHMKVE L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	334	RKRKAASKGKTKETRAIPSTKEIKNTKEDDNSEAKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-75	bHLH family protein