PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418405.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 578aa MW: 63646.2 Da PI: 7.3738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.8e-09	380	427	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_026418405.1 380 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 427 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MEKEKYFRGN SPPQLMDIQI GHHHHEQYGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS 60 NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN 120 SPPKLNLSMM DHQLRGNLAN SAQTHHQPLA PFPSDPGFAE RAARLSCFGT RTFGNLSSSS 180 PSQFGLNEPE LSASTYRSNN QNPSNGKLSR VSSSQSLKAT GSHQENNNNN ISNKDFSQLQ 240 DMILDNEMRS AADRRLSSRS TTPEKNAEFN QEDSSISEQI PEIGLKVGND HAASNGRKRK 300 AASKGKTKET RAIPSTKEIK NTKEDDNSEA KKSKSGDNDE KTKADSGEGS QKSKDNNQKP 360 PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII 420 NYVQSLQRQV EFLSMKLSTV NPRLDFNMEA LLSKDILHPR GGSFPHPNYP IDASVAAAFP 480 YGHQPSQHHV QNLQQQNGIT IGTENHCPLD AALRRNLGMQ LPSLDGFCES AAQLGAFWED 540 DLQSVVQMGF GGQNQGQETR YHPQNSHGLP STHMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MEKEKYFRGN SPPQLMDIQI GHHHHEQYGN FLNLNWDNSM DQNAPFESAL SSIVSSPVGS  60
NSSSLPPPQQ NSENVVIREL IGRLGSICNS GEISPHSGYI NVNNGGNNST NTSCYSTPLN  120
SPPKLNLSMM DHQLRGNLAN SAQTHHQPLA PFPSDPGFAE RAARLSCFGT RTFGNLSSSS  180
PSQFGLNEPE LSASTYRSNN QNPSNGKLSR VSSSQSLKAT GSHQENNNNN ISNKDFSQLQ  240
DMILDNEMRS AADRRLSSRS TTPEKNAEFN QEDSSISEQI PEIGLKVGND HAASNGRKRK  300
AASKGKTKET RAIPSTKEIK NTKEDDNSEA KKSKSGDNDE KTKADSGEGS QKSKDNNQKP  360
PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKAVMLDEII  420
NYVQSLQRQV EFLSMKLSTV NPRLDFNMEA LLSKDILHPR GGSFPHPNYP IDASVAAAFP  480
YGHQPSQHHV QNLQQQNGIT IGTENHCPLD AALRRNLGMQ LPSLDGFCES AAQLGAFWED  540
DLQSVVQMGF GGQNQGQETR YHPQNSHGLP STHMKVEL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	334	RKRKAASKGKTKETRAIPSTKEIKNTKEDDNSEAKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	6e-73	bHLH family protein