PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418327.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

G2-like

Protein Properties

Length: 361aa MW: 39788.1 Da PI: 6.698

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.4e-34	24	78	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtpeLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_026418327.1 24 KPRLRWTPELHDRFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 78 79****************************************************8 PP
2	Myb_DNA-binding	72.4	6.7e-23	26	77	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_026418327.1 26 RLRWTPELHDRFVDAVAQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 77 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNNNSHLQQD QSSNSGLVLT TDPKPRLRWT PELHDRFVDA VAQLGGPDKA TPKTIMRVMG 60 VKGLTLYHLK SHLQKFRLGK QPHKDFHDLH NSVKDFDPRD MQRNSGAGSS GIMGNRSNMN 120 ENMHMMNEGL RMQMEVKRRL HEQLVVQRHL QLRIEAQGKY MQTILEKACQ TLIGGAHENV 180 SSASASPALN SNALHHMAAG TRTAMMSSKG AGFANSTSFP SLQDLHIYGS GAQSTVGDHQ 240 QIALDDNVGG DQTMKQQMIG RSPSLSEIDV SRLGKNYRSG SSSNQPAFIW DDDFRLQQQQ 300 HQSFGTSTAS SSAPCLLSVG GNSQQDDSFM GIAHMEDPTG EDRDYHNCGN NDDETEEGSE 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNNNSHLQQD QSSNSGLVLT TDPKPRLRWT PELHDRFVDA VAQLGGPDKA TPKTIMRVMG  60
VKGLTLYHLK SHLQKFRLGK QPHKDFHDLH NSVKDFDPRD MQRNSGAGSS GIMGNRSNMN  120
ENMHMMNEGL RMQMEVKRRL HEQLVVQRHL QLRIEAQGKY MQTILEKACQ TLIGGAHENV  180
SSASASPALN SNALHHMAAG TRTAMMSSKG AGFANSTSFP SLQDLHIYGS GAQSTVGDHQ  240
QIALDDNVGG DQTMKQQMIG RSPSLSEIDV SRLGKNYRSG SSSNQPAFIW DDDFRLQQQQ  300
HQSFGTSTAS SSAPCLLSVG GNSQQDDSFM GIAHMEDPTG EDRDYHNCGN NDDETEEGSE  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	6e-72	G2-like family protein