PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417975.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 452aa    MW: 50013.5 Da    PI: 5.4427
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS360.72.1e-110854493374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96 
                      lLl+cAe +s ++l +a+ lL ++s+l+sp g++ +R+a+yf +AL++r+ + + ++y+ l + ++ + ++s++  +al+ ++ +sP++kfsh+
  XP_026417975.1  85 GLLLKCAESISMDNLDEASDLLPEISQLSSPFGTSPERVASYFGQALQSRIISCCIGTYSPLdSDKTLNLNQSQKICNALQSYNSISPLIKFSHF 179
                     58************************************************************5555556666999999***************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     taNqaI +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++  s+RiTg+gs    s  +l++tg+rL++fA++lg+pfefn+l  k  +  +
  XP_026417975.1 180 TANQAIFQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIRSMRITGIGS----SMLMLQATGKRLSDFASSLGLPFEFNPLEGKVGNITD 270
                     ****************************************55667*********....***************************9888888899 PP

            GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     l++L+ ++ gE+++V++++  h l+d ++s       +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l  +l+ +s +r+ 
  XP_026417975.1 271 LSRLSPRQgGETTIVHWMH--HCLYDVTGSDLG----TLSLLKILRPKLITIVEQDLSH-GGNFLGRFVEALHYYSALFDALGDGLSGDSIDRHQ 358
                     ******999*********9..888888888888....**********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                     vE++l+g ei+n+va  g +r+ + + + +W + l++ GFk+v+l+ + a+qa+lll +++++gy++   ee gsl lgWkd +L+++SaW+
  XP_026417975.1 359 VEQQLFGVEIRNIVAVGGPKRTGEVK-VDRWGDELRRIGFKSVSLGGNPAAQANLLLGMFPWKGYTLVedEETGSLKLGWKDLSLLTASAWQ 449
                     ********************998887.9**************************************99445589999**************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MIQSCSSNFL YHQSSSEYAA AANSVKTHKR MNQNDDELSI FNNSSDQSDD QNPPRKKQNF  60
EEQGRMMVTD NQSDDDESSG LRLLGLLLKC AESISMDNLD EASDLLPEIS QLSSPFGTSP  120
ERVASYFGQA LQSRIISCCI GTYSPLDSDK TLNLNQSQKI CNALQSYNSI SPLIKFSHFT  180
ANQAIFQALE GEDRIHIIDL DIMQGLQWPG LFHILASRSK KKIRSMRITG IGSSMLMLQA  240
TGKRLSDFAS SLGLPFEFNP LEGKVGNITD LSRLSPRQGG ETTIVHWMHH CLYDVTGSDL  300
GTLSLLKILR PKLITIVEQD LSHGGNFLGR FVEALHYYSA LFDALGDGLS GDSIDRHQVE  360
QQLFGVEIRN IVAVGGPKRT GEVKVDRWGD ELRRIGFKSV SLGGNPAAQA NLLLGMFPWK  420
GYTLVEDEET GSLKLGWKDL SLLTASAWQL LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-171GRAS family protein