PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026417975.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | GRAS | ||||||||
Protein Properties | Length: 452aa MW: 50013.5 Da PI: 5.4427 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 360.7 | 2.1e-110 | 85 | 449 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshl 96 lLl+cAe +s ++l +a+ lL ++s+l+sp g++ +R+a+yf +AL++r+ + + ++y+ l + ++ + ++s++ +al+ ++ +sP++kfsh+ XP_026417975.1 85 GLLLKCAESISMDNLDEASDLLPEISQLSSPFGTSPERVASYFGQALQSRIISCCIGTYSPLdSDKTLNLNQSQKICNALQSYNSISPLIKFSHF 179 58************************************************************5555556666999999***************** PP GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 taNqaI +a+ege+r+HiiD+di+qGlQWp L++ LasR+ ++ s+RiTg+gs s +l++tg+rL++fA++lg+pfefn+l k + + XP_026417975.1 180 TANQAIFQALEGEDRIHIIDLDIMQGLQWPGLFHILASRSkKKIRSMRITGIGS----SMLMLQATGKRLSDFASSLGLPFEFNPLEGKVGNITD 270 ****************************************55667*********....***************************9888888899 PP GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284 l++L+ ++ gE+++V++++ h l+d ++s +L+l+k l+Pk++++veq+++h +++Fl rf+eal+yysalfd+l +l+ +s +r+ XP_026417975.1 271 LSRLSPRQgGETTIVHWMH--HCLYDVTGSDLG----TLSLLKILRPKLITIVEQDLSH-GGNFLGRFVEALHYYSALFDALGDGLSGDSIDRHQ 358 ******999*********9..888888888888....**********************.789******************************** PP GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374 vE++l+g ei+n+va g +r+ + + + +W + l++ GFk+v+l+ + a+qa+lll +++++gy++ ee gsl lgWkd +L+++SaW+ XP_026417975.1 359 VEQQLFGVEIRNIVAVGGPKRTGEVK-VDRWGDELRRIGFKSVSLGGNPAAQANLLLGMFPWKGYTLVedEETGSLKLGWKDLSLLTASAWQ 449 ********************998887.9**************************************99445589999**************6 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 452 aa Download sequence |
MIQSCSSNFL YHQSSSEYAA AANSVKTHKR MNQNDDELSI FNNSSDQSDD QNPPRKKQNF 60 EEQGRMMVTD NQSDDDESSG LRLLGLLLKC AESISMDNLD EASDLLPEIS QLSSPFGTSP 120 ERVASYFGQA LQSRIISCCI GTYSPLDSDK TLNLNQSQKI CNALQSYNSI SPLIKFSHFT 180 ANQAIFQALE GEDRIHIIDL DIMQGLQWPG LFHILASRSK KKIRSMRITG IGSSMLMLQA 240 TGKRLSDFAS SLGLPFEFNP LEGKVGNITD LSRLSPRQGG ETTIVHWMHH CLYDVTGSDL 300 GTLSLLKILR PKLITIVEQD LSHGGNFLGR FVEALHYYSA LFDALGDGLS GDSIDRHQVE 360 QQLFGVEIRN IVAVGGPKRT GEVKVDRWGD ELRRIGFKSV SLGGNPAAQA NLLLGMFPWK 420 GYTLVEDEET GSLKLGWKDL SLLTASAWQL LE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G41920.1 | 1e-171 | GRAS family protein |