PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417940.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 329aa MW: 37255.2 Da PI: 6.5643

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ede+l ++v++ G g+W+t +++ g+ R++k+c++rw +yl XP_026417940.1 31 RGPWTPDEDEILSNYVQKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 78 89****************************99**********97 PP
2	Myb_DNA-binding	47.3	4.8e-15	85	129	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_026417940.1 85 GQIGEDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 129 556699*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MASSSSSGWK NSTTGKSSSK TPCCTKVGLK RGPWTPDEDE ILSNYVQKEG EGRWRTLPKR 60 AGLLRCGKSC RLRWMNYLRP SVKRGQIGED EEDLILRLHR LLGNRWSLIA GRIPGRTDNE 120 IKNYWNTHLS KKLISQGIDP RTHKPLMNPN PNNHYHEPPP PLFEPTSISN PKFIHPGHDD 180 SSTSAISSLE MSFGEAIDDK GNDNNRHEYL KGITTLNADQ NHYNLENSDG FIMGFRDMEE 240 DLHHHPEFNN DDVFSSFFNS LINDDVYVHQ HQQPQQHPTT AKNQVPLLDY TTPVDSSSTQ 300 SFGYSDVIME SAYSSPNITN GNAFQEMLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	3e-79	MYB family protein