PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417914.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 211aa    MW: 23597.1 Da    PI: 10.0696
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417914.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.41.7e-152072155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ k+v+YI +Lq
  XP_026417914.1 20 KKLNHNASERDRRKKLNNLYSSLRSLLPGsD---HTKKLSIPVTVSKVVKYIPDLQ 72
                    6789*************************44...6666****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPSSSGPNGA MSIDITSTVK KLNHNASERD RRKKLNNLYS SLRSLLPGSD HTKKLSIPVT  60
VSKVVKYIPD LQKQVDKLIQ RKEEILASIS KQQTASGGDQ LNNNYTIRDS KSRKVLAVKK  120
QALPTVSANR VDDREVVIQI CSLKVNIPLL SEVLLNLERE DFRVLNASAF DSSGDRVFYN  180
LHLQVKDTQS LQCEVLNEKL LSLCGKEVFF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-44bHLH family protein