PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417877.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 306aa MW: 34802.6 Da PI: 9.653

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.4	1.1e-29	36	86	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaeva+iifsstgkl+e+ss XP_026417877.1 36 KRIENATSRQVTFSKRRAGLLKKAQELSVLCDAEVALIIFSSTGKLFEFSS 86 79***********************************************96 PP
2	K-box	59.2	1.8e-20	120	205	15	100
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ++e++ Lk+ei++L+ ++ ++lG++L L lkeLq+Le+qL++++ ++++K++ll++++++++ +e+++ en+ Lrk++ee XP_026417877.1 120 RQQSKEISILKDEISKLRMTHLRMLGKELMGLGLKELQHLEDQLNEGMLLVKARKDNLLYDELDQSRLQEERAVMENRILRKQVEE 205 45689******************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MVQITTTTPG RREFTDTERK LEDRGRKMGR GKIEIKRIEN ATSRQVTFSK RRAGLLKKAQ 60 ELSVLCDAEV ALIIFSSTGK LFEFSSSGMK RTLSRYNKCQ DTSETTSLVE YDPEPIAMQR 120 QQSKEISILK DEISKLRMTH LRMLGKELMG LGLKELQHLE DQLNEGMLLV KARKDNLLYD 180 ELDQSRLQEE RAVMENRILR KQVEELQALV PSTERTRPPY LEFHSMDRKP SSHTKHGLLS 240 PKGVCHCSSK KRSSERHDDS DTSLHLGLAP DGYYKKKAAE RASAERVSAE RASSSSNDSD 300 TPMALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13790.1	1e-64	MIKC_MADS family protein