PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026417858.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 835aa MW: 92471.7 Da PI: 4.6655

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026417858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.8	1.8e-11	668	711	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++W++++ el++++++q+G++ ++ I + ++ gRt+ q+k+++ k XP_026417858.1 668 KQSWSQQDTELFYEGIRQFGTD-FAMIQQLFP-GRTRHQVKLKYKK 711 789*****************.*****.*********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 835 aa Download sequence
MFLTKNPNTL YFSNTEKKGL LMMNKLFLLL SQVYREVQLV DYKKSLKSRK VDFVGAGRGE 60 LFVGMDLDDL LSEPVVVNAR AGFKFQPKAR PKGKVKGTVL PTPSQFDSSK DKPVAVDDRH 120 ADILKSVAHL VPLAETVSVN SSADTPDEIP RNSTVIDSSS QPVIQHSVNH TGALFQEVSV 180 SDGDRIFASA NVSPQFGTRG ADVASPDPSF VGVANFSDIH ADKQAGFTRS GVETADIFSD 240 LESLDDILPQ PAMSNGNTVK KFQPKVKVNS QPTNKLPISR PVASEADSER LASVASNPNA 300 SIAPEINSNP DIVEVSQEVL NYGDAADALG VSWVGDMRLE REEEAFGGIN SQDTATGNPF 360 LVPCANESLE EDLTPTFPSD SFIDSSTMGF SNSVPRDASP EQLTHELESS AERSYPELVT 420 QEELVDLQAG HVISGGENER SVSAASNKNG TGKSSRLLRN EVSHPVAADE MAEETRENQH 480 LLSEPAQNSS GNVDNNDDYC RGEEAPNSNR TPENSKKPVS GNEKTGRRRK KADGPDSSDK 540 ELPKKKFSHS TRRNRRKVDK ILLETPDHEI DPRKLTLKDL ILLAEAKERL LSKDPNAAKN 600 SLPNQRNTRD TSFGEEDSFG LPEDSFGLRD DSFGLRDDSS FGYQDDEQAA PSAQPKLNYH 660 TFMKRTSKQS WSQQDTELFY EGIRQFGTDF AMIQQLFPGR TRHQVKLKYK KEEKQHPQRL 720 SDALTNRSKN HSHFELVIER LKKAAAEAEA EQNSNRDDES VGLTGEEEEV THDTNEEVTQ 780 NKNQDKFEEE EMGEGTMEAE EVATVNHQGY NPVKCHQESE EEDVYDIWSE YKSDI

Sequence ? help Back to Top

Protein Sequence Length: 835 aa Download sequence

MFLTKNPNTL YFSNTEKKGL LMMNKLFLLL SQVYREVQLV DYKKSLKSRK VDFVGAGRGE  60
LFVGMDLDDL LSEPVVVNAR AGFKFQPKAR PKGKVKGTVL PTPSQFDSSK DKPVAVDDRH  120
ADILKSVAHL VPLAETVSVN SSADTPDEIP RNSTVIDSSS QPVIQHSVNH TGALFQEVSV  180
SDGDRIFASA NVSPQFGTRG ADVASPDPSF VGVANFSDIH ADKQAGFTRS GVETADIFSD  240
LESLDDILPQ PAMSNGNTVK KFQPKVKVNS QPTNKLPISR PVASEADSER LASVASNPNA  300
SIAPEINSNP DIVEVSQEVL NYGDAADALG VSWVGDMRLE REEEAFGGIN SQDTATGNPF  360
LVPCANESLE EDLTPTFPSD SFIDSSTMGF SNSVPRDASP EQLTHELESS AERSYPELVT  420
QEELVDLQAG HVISGGENER SVSAASNKNG TGKSSRLLRN EVSHPVAADE MAEETRENQH  480
LLSEPAQNSS GNVDNNDDYC RGEEAPNSNR TPENSKKPVS GNEKTGRRRK KADGPDSSDK  540
ELPKKKFSHS TRRNRRKVDK ILLETPDHEI DPRKLTLKDL ILLAEAKERL LSKDPNAAKN  600
SLPNQRNTRD TSFGEEDSFG LPEDSFGLRD DSFGLRDDSS FGYQDDEQAA PSAQPKLNYH  660
TFMKRTSKQS WSQQDTELFY EGIRQFGTDF AMIQQLFPGR TRHQVKLKYK KEEKQHPQRL  720
SDALTNRSKN HSHFELVIER LKKAAAEAEA EQNSNRDDES VGLTGEEEEV THDTNEEVTQ  780
NKNQDKFEEE EMGEGTMEAE EVATVNHQGY NPVKCHQESE EEDVYDIWSE YKSDI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	1e-48	MYB_related family protein