PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026417058.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB
Protein Properties Length: 517aa    MW: 57876.8 Da    PI: 6.7109
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026417058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.1e-17128174148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT  Ed llv++vkq+G + W+ Ia+++g gR +kqc++rw+++l
   XP_026417058.1 128 KGQWTDGEDRLLVRLVKQYGERKWAQIAHKLG-GRAGKQCRERWHNHL 174
                      799*****************************.*************97 PP
2Myb_DNA-binding52.89.1e-17180222145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      ++ W++eE+ llv+ +++ G++ W+ Ia++++ gRt++++k++w+
   XP_026417058.1 180 KDTWSEEEERLLVETHQKVGNR-WAEIAKRIP-GRTENSIKNHWN 222
                      679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MENIRGDEFR AGFRVVLDRE TKNPHVVHHP PPLTAIDRFL LSSSSSEKQI SPTELCGSSS  60
TTINSFGGAV DGNGYLSLPS LTDISFVDGL LVDGNSDNFR NDGHKMKKIS KRLPESSLSM  120
PTSPIFIKGQ WTDGEDRLLV RLVKQYGERK WAQIAHKLGG RAGKQCRERW HNHLRPDIKK  180
DTWSEEEERL LVETHQKVGN RWAEIAKRIP GRTENSIKNH WNATKRRLNS RRKNNKRTAA  240
KSKASFLQSY INGSCIKENI LSSSSSSTTT TLAITEPPNG IFLNSSNQLS SVLHPEPSSD  300
SSFTDDSPLT LVAQTHDDEL LFIQKFFEDI YSKQQLVSSS LVHNKTQIGH ENTPTYDYGY  360
GHRNSSVFDI DSSSLQTLKY GDPPAMGIYN DHEFMVNVSS TSPSTDFTNF YTANNTIQDA  420
HDYSGGSTES CSINSCSTTN SSTHVNSDLY ISYLLNEVGS FSSSNNNTSE SQCYHGHPDS  480
FMDYLWTDGR GSYHTPMKRD MDLIEMVSFS NYSGSHD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1225237KRRLNSRRKNNKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58850.15e-54MYB family protein