PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416633.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HSF

Protein Properties

Length: 439aa MW: 48736.2 Da PI: 4.7645

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.1	6.9e-34	16	108	1	102
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 +F++k+y+i++d++++ +isw+e++nsfv+++++e++k++L Fkh+n++SFvRQLn YgFkkv++++ e++hk F +g+k+ll+ XP_026416633.1 16 EFVSKTYDIVDDPSTDAIISWTESNNSFVIWQPSELEKHILRMRFKHKNLSSFVRQLNNYGFKKVDHDR---------CEYAHKDFLRGQKHLLT 101 6*****************************************************************9.........67*********** PP XXXXXXX CS HSF_DNA-bind 96 kikrkks 102 +i+r++s XP_026416633.1 102 RIRRQES 108 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MMPQISDKLN QNSPIEFVSK TYDIVDDPST DAIISWTESN NSFVIWQPSE LEKHILRMRF 60 KHKNLSSFVR QLNNYGFKKV DHDRCEYAHK DFLRGQKHLL TRIRRQESGK VEKQQQQPQG 120 QSSSVSACVE VGKFGLEEEI ERLQRDKNVL MQEVVRLRQQ QQSTDLQLQT LGQRLQGMEQ 180 QQQQMMSFFV KAVQSPGFLA QLVQQHNENN RRIAGVNKKR RFPNLEDGHS TPASDGQIIK 240 YQPILNEATQ AMLTQPNLAS PSHRLDEDTN GDSISIDDIP SPSSTQLDSV STSNLISNVT 300 LLGVAPTSGH SLLSVPSGYS GMRLSAEFQS SGDVTDTLIT TTASPLPDMS FFDALEKDLM 360 QDMGLENEGT EIPGAGFVGH GTGNGDVYND SLGADDTISP FGSGQFSPDI DVDMLVDGYT 420 TKPPGTNGSF WEQFLTASA

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MMPQISDKLN QNSPIEFVSK TYDIVDDPST DAIISWTESN NSFVIWQPSE LEKHILRMRF  60
KHKNLSSFVR QLNNYGFKKV DHDRCEYAHK DFLRGQKHLL TRIRRQESGK VEKQQQQPQG  120
QSSSVSACVE VGKFGLEEEI ERLQRDKNVL MQEVVRLRQQ QQSTDLQLQT LGQRLQGMEQ  180
QQQQMMSFFV KAVQSPGFLA QLVQQHNENN RRIAGVNKKR RFPNLEDGHS TPASDGQIIK  240
YQPILNEATQ AMLTQPNLAS PSHRLDEDTN GDSISIDDIP SPSSTQLDSV STSNLISNVT  300
LLGVAPTSGH SLLSVPSGYS GMRLSAEFQS SGDVTDTLIT TTASPLPDMS FFDALEKDLM  360
QDMGLENEGT EIPGAGFVGH GTGNGDVYND SLGADDTISP FGSGQFSPDI DVDMLVDGYT  420
TKPPGTNGSF WEQFLTASA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	6e-74	HSF family protein