PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026416269.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 424aa MW: 48238.3 Da PI: 4.3688

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026416269.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	96.2	5e-30	60	194	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka......eekewyfFskrdkkyatgkrknr.atk..sgyWkatg 87 p G++F+P+dee v +yL k+ ++++l++ + ikev+iy++ P+dL k+k+ e ke+y F++r++ky++g+r++r +t gyW+ g XP_026416269.1 60 PEGLKFQPSDEEAVLYYLVKRSRNDQLPV-SPIKEVNIYEFTPEDLLDKYKNygiqgiEGKELYVFTPRERKYPNGSRPERyITGryIGYWQIFG 153 89*************************.88**********743333334445888****************6666678*** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k k++++++g+ +g++++L fykg++++ + t +m ey l XP_026416269.1 154 KPKDIFNTDGTPTGVRRSLNFYKGTKEDHSDTPFTMIEYIL 194 *************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MGDAERMISS EAPQKNYCGL YYCWECFRRE DSCNAEEGSS SLTPEQLLDA QVERYLKNFP 60 EGLKFQPSDE EAVLYYLVKR SRNDQLPVSP IKEVNIYEFT PEDLLDKYKN YGIQGIEGKE 120 LYVFTPRERK YPNGSRPERY ITGRYIGYWQ IFGKPKDIFN TDGTPTGVRR SLNFYKGTKE 180 DHSDTPFTMI EYILESRIQS KSGHQDGNKK QEPVKLALCK IWERLPAKEV LSPVAKSSME 240 NTDTTLLENA EYNSSELVME AHQGSSSSNM VTPTDNENAS RTNGFLQLQD YNIVDATNSY 300 GGFLDNKYIN NISFEQQYDL DLASLLDDTN TEFNSFEPAM GAYQDFTLMD MVTPNDGNFS 360 NINRSLQGHM AMEETFVNPF MTSGDHCLPG QKQNGELQGG QENQFESSVI LNDLYINGSS 420 SANQ

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MGDAERMISS EAPQKNYCGL YYCWECFRRE DSCNAEEGSS SLTPEQLLDA QVERYLKNFP  60
EGLKFQPSDE EAVLYYLVKR SRNDQLPVSP IKEVNIYEFT PEDLLDKYKN YGIQGIEGKE  120
LYVFTPRERK YPNGSRPERY ITGRYIGYWQ IFGKPKDIFN TDGTPTGVRR SLNFYKGTKE  180
DHSDTPFTMI EYILESRIQS KSGHQDGNKK QEPVKLALCK IWERLPAKEV LSPVAKSSME  240
NTDTTLLENA EYNSSELVME AHQGSSSSNM VTPTDNENAS RTNGFLQLQD YNIVDATNSY  300
GGFLDNKYIN NISFEQQYDL DLASLLDDTN TEFNSFEPAM GAYQDFTLMD MVTPNDGNFS  360
NINRSLQGHM AMEETFVNPF MTSGDHCLPG QKQNGELQGG QENQFESSVI LNDLYINGSS  420
SANQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-26	NAC family protein