PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026415383.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 335aa    MW: 37017.6 Da    PI: 7.4122
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026415383.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.83.7e-33175231158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekkl +ksrkpylheSRh+hA+rR+Rg+gGrF
  XP_026415383.1 175 EEPVYVNAKQYHGILRRRQSRAKAELEKKL-IKSRKPYLHESRHQHAMRRARGCGGRF 231
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MHSKPGNVNA SDLDEQSIPQ STTCSQPWWR GSVHNTETST ELGESSSKPS LIEQPDSRME  60
TNAKEIGDGG QNEGGGGTKE MQTTIAPQSG SDGQYGQEHQ NLQLAASTMP PAGGEYHIPR  120
PQFELVGHSI ACATYPYSDP YYAGMMGAMG SQSQVQPHLL GVRHSRMPLP LEISEEPVYV  180
NAKQYHGILR RRQSRAKAEL EKKLIKSRKP YLHESRHQHA MRRARGCGGR FLNTKKPEDS  240
SSMHTTEEGM TSDCNGNRNS SNGRQIVNDS TGQDRQESNS YSNNNTKSCY RHNQGLQLSS  300
FHSLSGERVE EEDCSGQQRG NIQVKQAQSR ALTIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.13e-54NF-YA family protein