PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026415261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 839aa MW: 91881.7 Da PI: 5.372 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 25.8 | 1.8e-08 | 84 | 111 | 1 | 27 |
--S---SGGGGTS.--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartG.tCkyGdrCkFaHgp 27 +kt+lC+f++r C++G++C++aH++ XP_026415261.1 84 WKTSLCSFYRRQDkDCSHGENCRYAHSE 111 8*********9669************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 839 aa Download sequence |
MATTLPETAT SQSQTLIPSP IEIDTDSSIG GNLKSEEIRS TNGGDSVDKL TEKHPGNDDE 60 TQGDKRKREG EDEEGETKAR HPMWKTSLCS FYRRQDKDCS HGENCRYAHS EEELRPRPDN 120 SWDPTSERAK KIMKLENGDN IVGKDDVRED VFMPDALVDS LDPSLDKCLL NLPKKWISDD 180 LKSFMDELGV VYKTARKKTG MAVGFVGFET ADLVKAGIER MDGKAIGNRH VKVANVVPRT 240 FEKKAMLTVP DSDDPDGPLS INGSEDGNAV PRARTVRDAV TPLAHMSYSD QLEHKKNSLA 300 QTLKRLTRHA RKACSGGVTL PEWILKSKEI GGLPCKLEGI VESPLVKGYR NKCEFSVGLS 360 VQGKPTVGFM LGNFREGVTA VEEPVDCPNV SQISCKLASI FQGYLQHSAL PVWNRIDNTG 420 FWRQLTVREG RNPGSNYDIE NFEANISEVM VMVQVCTTGI DKEVLTKEFQ SMALAFSEGV 480 SASSPPLPLT SLVVQDHTGI SNVAPADAPL KPLSMLKAKS ASGEESESSV VEGIHDYIGN 540 QRFCISPTAF FQVNTLAAEK LYSLAGDWAG LGPDTLLFDV CCGTGTIGLT LAHRVGMVVG 600 IEMNASAVLD AKRNAEINNI KNCRFICSKA EDVMGSLLKE YIDVAIEKEE PLRVSETNDS 660 GDASGQKESS LDGKVDLESI SNETSEANNE SGCPQICQEE VKGRIQTICS SEDQNGRNGS 720 LMRQYKDVVA IVDPPRAGLH PTVIKALRTH PSLRRIVYIS CNPESLVANA IELCTPSTDK 780 SEKGNTNNRG WRNRSVAGQA RQRAKSMPTS EPYQPIKAMA VDLFPHTPHC ETVMLLERF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28450.1 | 0.0 | C3H family protein |