PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415138.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 804aa MW: 89112.5 Da PI: 7.1979

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415138.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.6	5.7e-08	62	104	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+ + a +q G++ +++I ++++ + q++++++ + XP_026415138.1 62 AWTHEEERSFFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 104 6***************99.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MDMDMEFEEG VLSEGFFQSQ SLLIKEAEAA ADAATSPTSC IVDPQKRVRS KAVKRPTRQW 60 AAWTHEEERS FFTALRQVGK NFEKITSRVQ SKNKDQVRHY YYRLVRRMNK LLGPDFILDA 120 RNFKETNGAM LRWSALLEKY NCKASKLHLK PRRFKIIIEA LEQQLLKDRK KYVKKRRTKV 180 EKCSTTTPDI VSVPNKAPAA DTGAVKVVAV DSQNVPKGGS GRGSSVKRNV NTGINRKNNK 240 CDLSTVKTVK QRKKTGSSSS AAYKKWEKAA MAGVSLVADA AEHLERTTIS KETSPDRRSS 300 DESLPSIAVT AAEKGNDPFG VLPLLPLSAG FLTQVPDTCM PPNCGKLKLQ LFPIDEDTRK 360 ALEKDEHNPF LELTLSARKK ISSVLEHLNR KWGKSSIASG ELMLFQYDAQ RGNLVGHQRW 420 KQDTVASAAD VYTVIGSPPL FRLRYGWFFP ADLTLVASGM KEQTISSTTM PPLHDCHTCI 480 HLMKPSEGQQ TQIMEKNDVV PSYVDLTDDT VRYNGMDREN IIEDIAHSKS WPGKESGGEI 540 IRGPCNDGDN PRRSNNNPAS AGDWADTLSN ISIGELLVDQ SQAMGTNDFL SAAMDSSAFL 600 HQIPFSCDSF DAAIAAHIYG NRDKQDPLST QVPHASSIWD AEETCDAFSF QKIPRTPIPA 660 SFGTSRQTTD TSTMVNRSTV EELREVHHTG DNPICEVDLT NNNPSDAYKV DEYPKDLGGL 720 TDLYWPDSLG PLDLDIPSSR YQDQDLMLGD SVSLTGLNRL IASSLDAFQN CSFFGIDKKD 780 QPPPTTEARG TAAPFLDCKI GGEV

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MDMDMEFEEG VLSEGFFQSQ SLLIKEAEAA ADAATSPTSC IVDPQKRVRS KAVKRPTRQW  60
AAWTHEEERS FFTALRQVGK NFEKITSRVQ SKNKDQVRHY YYRLVRRMNK LLGPDFILDA  120
RNFKETNGAM LRWSALLEKY NCKASKLHLK PRRFKIIIEA LEQQLLKDRK KYVKKRRTKV  180
EKCSTTTPDI VSVPNKAPAA DTGAVKVVAV DSQNVPKGGS GRGSSVKRNV NTGINRKNNK  240
CDLSTVKTVK QRKKTGSSSS AAYKKWEKAA MAGVSLVADA AEHLERTTIS KETSPDRRSS  300
DESLPSIAVT AAEKGNDPFG VLPLLPLSAG FLTQVPDTCM PPNCGKLKLQ LFPIDEDTRK  360
ALEKDEHNPF LELTLSARKK ISSVLEHLNR KWGKSSIASG ELMLFQYDAQ RGNLVGHQRW  420
KQDTVASAAD VYTVIGSPPL FRLRYGWFFP ADLTLVASGM KEQTISSTTM PPLHDCHTCI  480
HLMKPSEGQQ TQIMEKNDVV PSYVDLTDDT VRYNGMDREN IIEDIAHSKS WPGKESGGEI  540
IRGPCNDGDN PRRSNNNPAS AGDWADTLSN ISIGELLVDQ SQAMGTNDFL SAAMDSSAFL  600
HQIPFSCDSF DAAIAAHIYG NRDKQDPLST QVPHASSIWD AEETCDAFSF QKIPRTPIPA  660
SFGTSRQTTD TSTMVNRSTV EELREVHHTG DNPICEVDLT NNNPSDAYKV DEYPKDLGGL  720
TDLYWPDSLG PLDLDIPSSR YQDQDLMLGD SVSLTGLNRL IASSLDAFQN CSFFGIDKKD  780
QPPPTTEARG TAAPFLDCKI GGEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	179	KKRRTK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.2	0.0	MYB_related family protein