PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026415008.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 631aa MW: 70568.4 Da PI: 6.9143

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026415008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.1e-23	2	103	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++i+r++++r++lt+GW+ Fv++++L +gD v+F + ++ XP_026415008.1 2 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVATDLHGVQWRFRHIFRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEN 93 99**************************963.3445679********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_026415008.1 94 GELRLGIRRA 103 999**996 PP
2	Auxin_resp	116	3.2e-38	128	210	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 +a+a+st+s+F+v+++Pra ++eFv +++k++k+++++ +vGmRfkm+fe+ed +err+sG+v+gvsdldp+rW++SkWr+Lk XP_026415008.1 128 VANAVSTRSMFHVFHSPRANPAEFVTPYKKYLKSINHPAAVGMRFKMRFEMEDTAERRCSGLVTGVSDLDPYRWRDSKWRCLK 210 689******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYKQQRPSQ ELVATDLHGV QWRFRHIFRG 60 QPRRHLLTTG WSIFVSQKNL VSGDAVLFLR GENGELRLGI RRAGRPRNSI PNSILGDQIT 120 NLNILSPVAN AVSTRSMFHV FHSPRANPAE FVTPYKKYLK SINHPAAVGM RFKMRFEMED 180 TAERRCSGLV TGVSDLDPYR WRDSKWRCLK VMWDDDLVGD HFDRISPWEI EPTSSAPVLS 240 IPSAPRLKKL RTLESTSPDH PVSGPGGVEF LGFNESGRSS KVLQGQENLG LRSPFYVGDG 300 KNQIVDFAMP NSTNRSLASS GFQEIGISDR FRAQPSTFTG FSGSSRFQVL QGQEIFPSLS 360 VHGRTDFNQI GSDKSNPHSI MFNSYQRPYP NFYPLASTDV RAMLMPYTDK FKENPDFMTN 420 SQREPMQSNL SSTQQSFSGF SAMTGDEICN SSYPNLVKEQ RPVNSVSPPP VAETNLGSHS 480 DELQDGTKVC KLFGFSLTGE VPTSNSPNSS KRSCTKVHKQ GNLVGRAVDL SRLDSYTDLL 540 SELEKLFNME GLLSNPEKGW QIVYTDSEND MMVVGDDPWH EFCSIVSKIH IYTQEEVEKM 600 TIGMISDDTQ SCLEEAPPAV LDVSKSLMDF K

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYKQQRPSQ ELVATDLHGV QWRFRHIFRG  60
QPRRHLLTTG WSIFVSQKNL VSGDAVLFLR GENGELRLGI RRAGRPRNSI PNSILGDQIT  120
NLNILSPVAN AVSTRSMFHV FHSPRANPAE FVTPYKKYLK SINHPAAVGM RFKMRFEMED  180
TAERRCSGLV TGVSDLDPYR WRDSKWRCLK VMWDDDLVGD HFDRISPWEI EPTSSAPVLS  240
IPSAPRLKKL RTLESTSPDH PVSGPGGVEF LGFNESGRSS KVLQGQENLG LRSPFYVGDG  300
KNQIVDFAMP NSTNRSLASS GFQEIGISDR FRAQPSTFTG FSGSSRFQVL QGQEIFPSLS  360
VHGRTDFNQI GSDKSNPHSI MFNSYQRPYP NFYPLASTDV RAMLMPYTDK FKENPDFMTN  420
SQREPMQSNL SSTQQSFSGF SAMTGDEICN SSYPNLVKEQ RPVNSVSPPP VAETNLGSHS  480
DELQDGTKVC KLFGFSLTGE VPTSNSPNSS KRSCTKVHKQ GNLVGRAVDL SRLDSYTDLL  540
SELEKLFNME GLLSNPEKGW QIVYTDSEND MMVVGDDPWH EFCSIVSKIH IYTQEEVEKM  600
TIGMISDDTQ SCLEEAPPAV LDVSKSLMDF K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein