PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414593.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 446aa MW: 49667.4 Da PI: 6.7911

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.9	1.4e-14	101	160	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse...ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+ ++ k ++++lg ++ +e Aa ++ a++k++g XP_026414593.1 101 SIYRGVTRHRWTGRYEAHLWDkNSWnpiQNkKGRQVYLGAYDDEEAAAHTYDLAALKYWG 160 57*****************888855544455***********************98 PP
2	AP2	48.6	2.1e-15	203	254	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa+a++ a+ + +g XP_026414593.1 203 SKYRGVARHHHNGRWEARIGRVLG---NKYLYLGTYSTQEEAAAAYDIAAIEHRG 254 89**99******988422...5********************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MMLIMMKRSP HSSDSCSSSS SSSSSSSSTN SSSTEIKPLT SLISTTNQLL VPLSPLHHHP 60 LPPPHTLPSK LKPVKPKTKR TRRTSNPEKA KFAASPGRRS SIYRGVTRHR WTGRYEAHLW 120 DKNSWNPIQN KKGRQVYLGA YDDEEAAAHT YDLAALKYWG PDTILNFPFI TYQKDFDDMQ 180 LVTKEEYLAS LRRRSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVLGNKYL YLGTYSTQEE 240 AAAAYDIAAI EHRGMNAVTN FDISHYSGLI KCAQPSPSPP PPQHLCQQYQ QSPSCSYFAE 300 SQEMTSRILT PELPQSVNDH SPVMVDPMED NSWSLCMDSG FNPLPVPNID LEKSGELPDL 360 FNDSGFEDNI ECLFEGINTK EEFGSPGERD NALNLDSFFN SLLDFDSGDL LGSLGVEGEE 420 NLNSNGASAR NASPSVPYPL PIRICS

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MMLIMMKRSP HSSDSCSSSS SSSSSSSSTN SSSTEIKPLT SLISTTNQLL VPLSPLHHHP  60
LPPPHTLPSK LKPVKPKTKR TRRTSNPEKA KFAASPGRRS SIYRGVTRHR WTGRYEAHLW  120
DKNSWNPIQN KKGRQVYLGA YDDEEAAAHT YDLAALKYWG PDTILNFPFI TYQKDFDDMQ  180
LVTKEEYLAS LRRRSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVLGNKYL YLGTYSTQEE  240
AAAAYDIAAI EHRGMNAVTN FDISHYSGLI KCAQPSPSPP PPQHLCQQYQ QSPSCSYFAE  300
SQEMTSRILT PELPQSVNDH SPVMVDPMED NSWSLCMDSG FNPLPVPNID LEKSGELPDL  360
FNDSGFEDNI ECLFEGINTK EEFGSPGERD NALNLDSFFN SLLDFDSGDL LGSLGVEGEE  420
NLNSNGASAR NASPSVPYPL PIRICS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	7e-85	AP2 family protein