PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414452.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 443aa    MW: 48768.9 Da    PI: 7.5694
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.79e-13377422655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk+Lq
  XP_026414452.1 377 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 422
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    
MYSGSQTSAK DMNLLFPSSS TFKNSSEGGG GGDNLQRSRE ASMDVNLFHR RQPNHQQNQQ  60
QFNSGLMRYR SAPSSLLEKL INGEDEGGCD NFIPPPTHSS PSEAESIFAR FMSIAGNDSS  120
DLREINEKSA VNNRNTPQFM EQETIEENNV FPPTSQMMFQ NPSIPSSQPQ QNSLQRQNSL  180
NPTESPYRGV NSVNIDQNSS PLKMGSATNS TSNLIRHSSS PAGLFANLNV ENGYAVMRGM  240
GTAGNSRLKS QMSFPSRPPT SSGLMSQISE IESEGGNSGE EGSLSNGNNR FIPGFPVASW  300
DDGLENYTGV KRARDINNKM MNPSEAQSGE VGNHTTGLTH HFSLPKNSAE MAAILQYQDS  360
VPCKIRAKRG CATHPRSIAE RVRRTRISER MRKLQELVPN MDKQTNTADM LDLAVEYIKD  420
LQTQVKTLNN NQVNCTCSNK QKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.15e-71bHLH family protein