PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026414443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | TCP | ||||||||
Protein Properties | Length: 258aa MW: 28557.3 Da PI: 7.667 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 103.9 | 2.6e-32 | 50 | 124 | 7 | 66 |
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............s 66 +++++hTkv+gR+RRvR++a aar+F+L++eLG+ +d++ti+WLl++a+p+i+++tgt XP_026414443.1 50 KTKDRHTKVNGRGRRVRIPAMSAARIFQLTRELGHRSDGETIDWLLRKAEPSIIAATGTgitpiscvttsasptR 124 79*********************************************************4444444332222220 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MDSQLIFTSD NQVTQNQEEN LQISVIKTEE GTESSEKLTV RRRRVSSGAK TKDRHTKVNG 60 RGRRVRIPAM SAARIFQLTR ELGHRSDGET IDWLLRKAEP SIIAATGTGI TPISCVTTSA 120 SPTRRPPPQP HSPSQALPLL LSSSASSVPS CSQLAVQLMP EDPTRNVYPD QNVGKLVPKV 180 EFDSEAMDCK LDLGITPMYM DFSLGDPYRH MPFTELLLQA NGAGNLHDPS YSDQKKSVDF 240 EHVTPMQILK GNPYHHLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69690.1 | 6e-24 | TCP family protein |