PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414377.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 754aa    MW: 84844.7 Da    PI: 5.3245
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3858.9e-1183817521374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+avs++d + a++lL ++++++ pdgd  qRla++f+++L+arla+s+se+y++l  ++ts    ++ l+a++lf  + P+ k+s+
  XP_026414377.1 381 LRTLLIHCAQAVSADDRRTASELLRQIRQHSPPDGDGSQRLAHCFANGLEARLAGSGSEIYSTLLHKRTS---AADILKAYHLFMGTVPFKKISN 472
                     6789************************************************************999998...8********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aNq+I + +++++++Hi+Df+i +G+QWp+L+q L++R++gpp++RiTg++ pe+g   +e +eetg+rL+++Ae+++vpfe+++ +a+++e+
  XP_026414377.1 473 FFANQTIDDLADKATTLHIVDFGILYGFQWPCLIQRLSKRKGGPPKIRITGIELPEPGfrPSELVEETGRRLKSYAEKFHVPFEYHA-IAQKWET 566
                     *********************************************************9*9999************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le+L++ ++E+l+Vn+ ++  +llde+v l+s+r++vL+l+++++P+v+++  ++  ++s+ F++rf eal ++s+lfd l++++pre+ eri
  XP_026414377.1 567 IQLEDLNIAKDEVLVVNFLFRARNLLDETVILDSPRNAVLNLIRKMNPDVFIHGVSNGAYSSPFFVTRFREALFHFSSLFDVLDTNIPREHPERI 661
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Er +lg+e+ n++aceg++r+er et+++W++r ++aGF ++pl ++++k+ak  ++  + + + v+ +s++++lgWk+r L+++S+Wr
  XP_026414377.1 662 LIERDILGKEALNIIACEGSQRVERPETYKQWQARNTRAGFVQLPLHKDIMKKAKERVKSDYHKDFIVDADSQWMLLGWKGRILFALSSWR 752
                     ************************************************************99888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 754 aa     Download sequence    
MDMDSRLRGL LDSINGNSES VSDMNFFTSE ENNNNSLDQS SIDQNPNFSS SSNSFADHSM  60
TASSSNFSLQ EDFSPGEEYD FSDVVLKYIT QMLMEEDIEE KNCMLQDCSA LLATEKPFYE  120
ILGEKYYPPS PHCNPEGQVD NSTQYHGSNN CSSSGSSSNN AAETSWAGAL GEYQPLSHSQ  180
SVLSDYTFQM TPQSAFDPSN GSNSVVEGKV DSPGDKVQVH DVYSESDFIW QFRKGVEEAN  240
KFLPDDTNLI IDLESNSFLN DERNKEAGDV EVKLEKKDEK ETSPTGSRGK KNLHREDTGL  300
EEGRSNKQPA VFSEETVRSA MFDMVLLCGN EEKCDKEDST PHKSLKTEAT KNLQQNGQSK  360
GSNGGKPRGR KQKSKGDVVD LRTLLIHCAQ AVSADDRRTA SELLRQIRQH SPPDGDGSQR  420
LAHCFANGLE ARLAGSGSEI YSTLLHKRTS AADILKAYHL FMGTVPFKKI SNFFANQTID  480
DLADKATTLH IVDFGILYGF QWPCLIQRLS KRKGGPPKIR ITGIELPEPG FRPSELVEET  540
GRRLKSYAEK FHVPFEYHAI AQKWETIQLE DLNIAKDEVL VVNFLFRARN LLDETVILDS  600
PRNAVLNLIR KMNPDVFIHG VSNGAYSSPF FVTRFREALF HFSSLFDVLD TNIPREHPER  660
ILIERDILGK EALNIIACEG SQRVERPETY KQWQARNTRA GFVQLPLHKD IMKKAKERVK  720
SDYHKDFIVD ADSQWMLLGW KGRILFALSS WRPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein