PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026414136.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 409aa    MW: 43621.2 Da    PI: 8.2408
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026414136.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.31.3e-085278127
                    --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                    ++++ C++f++t  C++G +CkF+H++
  XP_026414136.1 52 PGEPACPYFLKTKKCRFGFKCKFNHPK 78
                    57899********************96 PP

2zf-CCCH34.82.8e-11102125427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     ++C f+ +tG+Ck+G++CkF+H++
  XP_026414136.1 102 PPCAFYVKTGICKFGESCKFHHPK 125
                     89********************96 PP

3zf-CCCH38.81.6e-12176202127
                     --S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                     ++++ C+f+++tG CkyG++C+++H++
  XP_026414136.1 176 PGEVDCPFYLKTGSCKYGATCRYSHPE 202
                     57899********************96 PP

4zf-CCCH36.96.1e-12262286226
                     -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   2 ktelCrffartGtCkyGdrCkFaHg 26 
                     ++ +C f+++tG Ck+G+rCk++H+
  XP_026414136.1 262 GQTECAFYMKTGDCKFGERCKYHHP 286
                     6789********************8 PP

5zf-CCCH41.81.8e-13315338427
                     ---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHgp 27 
                     + C+f+++tG CkyG++C+F H+p
  XP_026414136.1 315 VVCPFYMKTGACKYGSSCRFDHPP 338
                     67********************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MTDIGFLQFH NSPYGHLVLM RLLLSAVVLL VLSVLLPKVP LVPLGDTLPE RPGEPACPYF  60
LKTKKCRFGF KCKFNHPKDI AKSVDASKIV DLSLLPERPY APPCAFYVKT GICKFGESCK  120
FHHPKDIQIP VTGQENGCAE HDASVGSFDR IMSVKPPFVP FTPASLHNTK GLPVRPGEVD  180
CPFYLKTGSC KYGATCRYSH PERAVINISV APGLGQAMMT SSASSMNVGL INPAALVLPT  240
IDPRLGQAAL GLGVAVYPQR PGQTECAFYM KTGDCKFGER CKYHHPIDRT AATQPMPKQD  300
VKLTLAGLPR REGAVVCPFY MKTGACKYGS SCRFDHPPPG EAVAMATVVQ GSSSAPPSGE  360
AIAMPTVTQG SSDAAEGGEG NNNNNNNNNE GGGDHTIVPE AAISFGSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.11e-122C3H family protein