PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026414126.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 757aa MW: 84521.4 Da PI: 9.9074

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026414126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1.1e-10	16	64	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqk 46 W t+E++ll++avk++G+ +W+++a++++ t+ +ck ++++ XP_026414126.1 16 VWGTWEELLLACAVKKHGTSNWELVANEIQnkntntiV--TPHNCKQKYHD 64 7*****************************65555322..67777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MGGNEGGGGR IRDMMVWGTW EELLLACAVK KHGTSNWELV ANEIQNKNTN TIVTPHNCKQ 60 KYHDLHQRFM IVDDDDSEIT DGRRHNNNHN DNDDENLYSN NNNNRIPWLD ELRKLRVAEL 120 RREVQEYDVS ILSLQLKVRR LEEEREESLK KDNNINNLDV KPDLLENRAK EEEEDGKQIQ 180 TEPLRSPIEN KADKPVPGDE SDRDNQSFNE SNSSDLKDVK KKSPEVEKIP ETVTEKQDRL 240 GEDSCNGSSE TIAKDSVVRD VKKSSETTIP VTETREPTEL WESVAESKSG GNGGEEGTKE 300 SSDVQSSASL SKRNRRRKIT SGSSSGEERE TDEVSPAIKR SSVKSEEEPP LLGFLDMILS 360 HKFGSLFESR LESQETSEYK GLIRQHIDIK TIRTRLKEGS YNGSCSWKFF RDLLLLFNNA 420 IVFYPKNSSE SVAATELRDL VLKGISSRSS RSSSSRSQNN NPSPREPTAP KLQQSTLLLP 480 KSDPELSDSF LPKSKPTGLI FACRKRSSIS AKAGNSAKPV EFKGSDQKIV EEKPVLDKKL 540 KENASAVEEQ IVFSKRKGQR SVSGARSSAS NFKNRNNNNT DRNSSKGGSG FGGDETNLET 600 KKEKDKKNDS NNASTALTDT VAKKKSAANF LNRMKTTSTS SNNVKLLETL KNSSSGNNSN 660 TTRGEKGGSS KDEKHRGKGS GSGSKKDDQV TRQGDQVTRQ GSSKRQRAQE SSPVKRSVGR 720 PPKKAPLLPP PSSSKRTRER EKEAEAEVRQ PRKRTRR

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MGGNEGGGGR IRDMMVWGTW EELLLACAVK KHGTSNWELV ANEIQNKNTN TIVTPHNCKQ  60
KYHDLHQRFM IVDDDDSEIT DGRRHNNNHN DNDDENLYSN NNNNRIPWLD ELRKLRVAEL  120
RREVQEYDVS ILSLQLKVRR LEEEREESLK KDNNINNLDV KPDLLENRAK EEEEDGKQIQ  180
TEPLRSPIEN KADKPVPGDE SDRDNQSFNE SNSSDLKDVK KKSPEVEKIP ETVTEKQDRL  240
GEDSCNGSSE TIAKDSVVRD VKKSSETTIP VTETREPTEL WESVAESKSG GNGGEEGTKE  300
SSDVQSSASL SKRNRRRKIT SGSSSGEERE TDEVSPAIKR SSVKSEEEPP LLGFLDMILS  360
HKFGSLFESR LESQETSEYK GLIRQHIDIK TIRTRLKEGS YNGSCSWKFF RDLLLLFNNA  420
IVFYPKNSSE SVAATELRDL VLKGISSRSS RSSSSRSQNN NPSPREPTAP KLQQSTLLLP  480
KSDPELSDSF LPKSKPTGLI FACRKRSSIS AKAGNSAKPV EFKGSDQKIV EEKPVLDKKL  540
KENASAVEEQ IVFSKRKGQR SVSGARSSAS NFKNRNNNNT DRNSSKGGSG FGGDETNLET  600
KKEKDKKNDS NNASTALTDT VAKKKSAANF LNRMKTTSTS SNNVKLLETL KNSSSGNNSN  660
TTRGEKGGSS KDEKHRGKGS GSGSKKDDQV TRQGDQVTRQ GSSKRQRAQE SSPVKRSVGR  720
PPKKAPLLPP PSSSKRTRER EKEAEAEVRQ PRKRTRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	1e-65	MYB_related family protein