PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026414114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C3H | ||||||||
Protein Properties | Length: 487aa MW: 52591.2 Da PI: 8.1468 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 28.1 | 3.5e-09 | 79 | 103 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ C++++ t tC++ d+CkF H+ XP_026414114.1 79 GETDCSHYMLTRTCRFADTCKFDHP 103 6789********************8 PP | |||||||
2 | zf-CCCH | 26 | 1.6e-08 | 130 | 156 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C++f++t C++G +CkF+H++ XP_026414114.1 130 PGEPACPYFLKTKKCRFGFKCKFNHPK 156 57899********************96 PP | |||||||
3 | zf-CCCH | 34.5 | 3.5e-11 | 180 | 203 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 ++C f+ +tG+Ck+G++CkF+H++ XP_026414114.1 180 PPCAFYVKTGICKFGESCKFHHPK 203 89********************96 PP | |||||||
4 | zf-CCCH | 38.5 | 1.9e-12 | 254 | 280 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 ++++ C+f+++tG CkyG++C+++H++ XP_026414114.1 254 PGEVDCPFYLKTGSCKYGATCRYSHPE 280 57899********************96 PP | |||||||
5 | zf-CCCH | 36.6 | 7.5e-12 | 340 | 364 | 2 | 26 |
-S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHg 26 ++ +C f+++tG Ck+G+rCk++H+ XP_026414114.1 340 GQTECAFYMKTGDCKFGERCKYHHP 364 6789********************8 PP | |||||||
6 | zf-CCCH | 41.5 | 2.2e-13 | 393 | 416 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 + C+f+++tG CkyG++C+F H+p XP_026414114.1 393 VVCPFYMKTGACKYGSSCRFDHPP 416 67********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 487 aa Download sequence |
MTDIGFLQFH NSPYGHLVLM RLLLSAVVLL VLSVLLPKTY LGTSNTFGQS EAFYSANNLS 60 KRPRFESTSH LPIYPQRPGE TDCSHYMLTR TCRFADTCKF DHPIWVPEGG IPNWKEVPLV 120 PLGDTLPERP GEPACPYFLK TKKCRFGFKC KFNHPKDIAK SVDASKIVDL SLLPERPYAP 180 PCAFYVKTGI CKFGESCKFH HPKDIQIPVT GQENGCAEHD ASVGSFDRIM SVKPPFVPFT 240 PASLHNTKGL PVRPGEVDCP FYLKTGSCKY GATCRYSHPE RAVINISVAP GLGQAMMTSS 300 ASSMNVGLIN PAALVLPTID PRLGQAALGL GVAVYPQRPG QTECAFYMKT GDCKFGERCK 360 YHHPIDRTAA TQPMPKQDVK LTLAGLPRRE GAVVCPFYMK TGACKYGSSC RFDHPPPGEA 420 VAMATVVQGS SSAPPSGEAI AMPTVTQGSS DAAEGGEGNN NNNNNNNEGG GDHTIVPEAA 480 ISFGSTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12680.1 | 1e-172 | C3H family protein |