PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413909.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 439aa MW: 47889.6 Da PI: 4.9981

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413909.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	66.4	1e-20	20	81	4	65
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 +k+ ++h+kv+gR+ R+R++a+ca +F+L++eLG+ +d++t+ WLl+q p+ + + XP_026413909.1 20 RKRGITDRHAKVDGRGCRIRIPASCAPGIFQLTNELGHRSDGETVHWLLEQIRPELVDNPHK 81 677778**********************************************9998776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MGEPRNQIQS YQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD 60 GETVHWLLEQ IRPELVDNPH KSPLKSLPPP VPDPIASPNP VAFSYLDDYS SENGNPATSS 120 GHDVVDDEEN LVDNGVRPTI RATVVQASTV FYDTPATLDK AERLIAGAAA YGAELVVFPE 180 AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HAAAIDVPGP EVDRLAGIAR KYEVHLVMGV 240 VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI 300 CWDNRMPLLR SELYSKDARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP LQQQCVSGDT 360 NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERGKL EFHGVVGVGH 420 TVWPESLNPL AFTAKVENC

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MGEPRNQIQS YQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD  60
GETVHWLLEQ IRPELVDNPH KSPLKSLPPP VPDPIASPNP VAFSYLDDYS SENGNPATSS  120
GHDVVDDEEN LVDNGVRPTI RATVVQASTV FYDTPATLDK AERLIAGAAA YGAELVVFPE  180
AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HAAAIDVPGP EVDRLAGIAR KYEVHLVMGV  240
VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI  300
CWDNRMPLLR SELYSKDARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP LQQQCVSGDT  360
NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERGKL EFHGVVGVGH  420
TVWPESLNPL AFTAKVENC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-19	TCP family protein