PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413908.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 449aa MW: 48922.9 Da PI: 4.93

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	66.3	1e-20	20	81	4	65
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 +k+ ++h+kv+gR+ R+R++a+ca +F+L++eLG+ +d++t+ WLl+q p+ + + XP_026413908.1 20 RKRGITDRHAKVDGRGCRIRIPASCAPGIFQLTNELGHRSDGETVHWLLEQIRPELVDNPHK 81 677778**********************************************9998776666 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MGEPRNQIQS YQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD 60 GETVHWLLEQ IRPELVDNPH KSPLKSLPPP VPDPIASPNP VAFSYLDDYS SENGNPATSS 120 GHDVVDDEEN LVDNGVRPTI RATVVQASTV FYDTPATLDK AERLIAGAAA YGAELVVFPE 180 AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HAAAIDVPGP EVDRLAGIAR KYEVHLVMGV 240 VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI 300 CWDNRMPLLR SELYSKGVEI YCVPTADARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP 360 LQQQCVSGDT NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERGKL 420 EFHGVVGVGH TVWPESLNPL AFTAKVENC

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MGEPRNQIQS YQQESITNKR KRGITDRHAK VDGRGCRIRI PASCAPGIFQ LTNELGHRSD  60
GETVHWLLEQ IRPELVDNPH KSPLKSLPPP VPDPIASPNP VAFSYLDDYS SENGNPATSS  120
GHDVVDDEEN LVDNGVRPTI RATVVQASTV FYDTPATLDK AERLIAGAAA YGAELVVFPE  180
AFVGGYPRIP NFGVTGGRNS IEENDEFQKY HAAAIDVPGP EVDRLAGIAR KYEVHLVMGV  240
VEREGSILYS SVIYFDCQGQ YLGGHRKVML TALEHDVWHS GDKATLPAYK TSIGNIGGLI  300
CWDNRMPLLR SELYSKGVEI YCVPTADARD TWRASMTHTA IEGGCFVISA NQYCQRKDYP  360
LQQQCVSGDT NSELSPDSVV CSGGSIIISP SGAILAGPNY QEESLISADL DLGEIERGKL  420
EFHGVVGVGH TVWPESLNPL AFTAKVENC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	1e-19	TCP family protein