PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413748.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRF

Protein Properties

Length: 425aa MW: 46893 Da PI: 8.5889

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	80.2	1.9e-25	157	200	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs++v++g+k+CErH+hrgr+rsrk++e XP_026413748.1 157 DPEPGRCRRTDGKKWRCSKDVVSGQKYCERHMHRGRNRSRKPVE 200 79***************************************997 PP
2	QLQ	50.4	6.9e-18	85	118	2	35
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 +F+ aQ+q+L+ Q+l++Ky++a++ vP+eLlq+i XP_026413748.1 85 SFSLAQWQELELQALIFKYMLAGATVPSELLQPI 118 8********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDYYHLRDWR NQQHESDHAA KIPRLFLDQP HQEAASESSS ALPLFVPDHE HHHHQQQLGN 60 RSIISNLSAF PDSTNPSRVS RMIGSFSLAQ WQELELQALI FKYMLAGATV PSELLQPIIK 120 KSLFNTPPPS PFFLHQQYQH YQPNMLQSGY WGRTSVDPEP GRCRRTDGKK WRCSKDVVSG 180 QKYCERHMHR GRNRSRKPVE ISTRPIITNN PSSSVTIASV GNSNGLIKST NNTVAPVAAL 240 PLTAMGNTNK NSGNAFVISC GPSSNSSPSM DLLHLNQRYC ESERRSNDSS VLGDDGRTDG 300 QVLRHFFDDW PKKSQHQPTN GVGNSADGRT SSTCLSISIE NGEEHPKPSS DFSLKLATGV 360 EDESGKGNRR DERSQVMNWG GMSNSMGGGP LAEALRLSSN SSSPTSVLHP PPQVSGSESS 420 SIITK

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDYYHLRDWR NQQHESDHAA KIPRLFLDQP HQEAASESSS ALPLFVPDHE HHHHQQQLGN  60
RSIISNLSAF PDSTNPSRVS RMIGSFSLAQ WQELELQALI FKYMLAGATV PSELLQPIIK  120
KSLFNTPPPS PFFLHQQYQH YQPNMLQSGY WGRTSVDPEP GRCRRTDGKK WRCSKDVVSG  180
QKYCERHMHR GRNRSRKPVE ISTRPIITNN PSSSVTIASV GNSNGLIKST NNTVAPVAAL  240
PLTAMGNTNK NSGNAFVISC GPSSNSSPSM DLLHLNQRYC ESERRSNDSS VLGDDGRTDG  300
QVLRHFFDDW PKKSQHQPTN GVGNSADGRT SSTCLSISIE NGEEHPKPSS DFSLKLATGV  360
EDESGKGNRR DERSQVMNWG GMSNSMGGGP LAEALRLSSN SSSPTSVLHP PPQVSGSESS  420
SIITK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	1e-49	GRF family protein