PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413578.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Dof

Protein Properties

Length: 387aa MW: 43289 Da PI: 7.4226

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.3e-39	46	104	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +alkcprCds+ntkfCyynnysl+qPryfCkaCrryWtkGG+lrnvPvGgg+rkn+k+ XP_026413578.1 46 PEALKCPRCDSSNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNNKR 104 6789****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MDPSNSHQHQ QGMATHTPAF EDVLNCPSAK ELQERQKRSL MNRPQPEALK CPRCDSSNTK 60 FCYYNNYSLT QPRYFCKACR RYWTKGGSLR NVPVGGGCRK NNKRISSCSS SSATSKAKSS 120 PSSSISSHHH HHQDNNNNQI YLNTNSIINP LLTFPSSLSY DTNDLTLAFG RLHKQQPTTT 180 RQLGFDHEHH QTSYGNTNSI IGNLINSSSN SSNTANPGFI DALRSGFLDP SSGFHNFYSS 240 YGNGISMGDH HQQHQQQQQV ESNNNNNNNN GGSIINGNCH EEDDDQHHRD EQVVLPNYDQ 300 VEMGLTSTTS STITTATKQE MLKDNETKIL WNFPWHGQFG GEQGNHHHHN NNSIHNNIMG 360 NVIDTSSGVR DWNGLNGWHG LVNSPLM

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MDPSNSHQHQ QGMATHTPAF EDVLNCPSAK ELQERQKRSL MNRPQPEALK CPRCDSSNTK  60
FCYYNNYSLT QPRYFCKACR RYWTKGGSLR NVPVGGGCRK NNKRISSCSS SSATSKAKSS  120
PSSSISSHHH HHQDNNNNQI YLNTNSIINP LLTFPSSLSY DTNDLTLAFG RLHKQQPTTT  180
RQLGFDHEHH QTSYGNTNSI IGNLINSSSN SSNTANPGFI DALRSGFLDP SSGFHNFYSS  240
YGNGISMGDH HQQHQQQQQV ESNNNNNNNN GGSIINGNCH EEDDDQHHRD EQVVLPNYDQ  300
VEMGLTSTTS STITTATKQE MLKDNETKIL WNFPWHGQFG GEQGNHHHHN NNSIHNNIMG  360
NVIDTSSGVR DWNGLNGWHG LVNSPLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	5e-38	Dof family protein