PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026413359.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GeBP

Protein Properties

Length: 376aa MW: 41373.7 Da PI: 10.2826

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026413359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	72.9	5.8e-23	119	208	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +fqr++seeDei lL+G+ + ++t +p +ye v ks+s +++++qlveKir+L++K++k+v + ++ +++hd+++f++s+kiW XP_026413359.1 119 RFQRVFSEEDEIHLLKGFFEIIQDTP-NPALAAPMLYERVGKSLSGEINQTQLVEKIRKLRQKYTKQVME-----NIMPKNPHDKEVFDISNKIW 207 79*****************99998.99999******************************9999.....8999************** PP DUF573 97 g 97 g XP_026413359.1 208 G 208 8 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MLPIALAHSP KLSHSSPPLS LSSESLSDFR LFPHHKLYSS SHNSHHHHHH HHSQPPTNFR 60 STIMSTVSAE APSSKKPKIA SGGNHRESTP ESPENINTIT NITGATPPSA TPNTDRKPRF 120 QRVFSEEDEI HLLKGFFEII QDTPNPALAA PMLYERVGKS LSGEINQTQL VEKIRKLRQK 180 YTKQVMENIM PKNPHDKEVF DISNKIWGEN PARGRRNSPK GPSNKRVRKR KSSSGGDVPK 240 GGIIVGLPSS SIPPADNNNN DNKAHVADKA NYAAEGLNGA DAAAAAAVTV AFAPAVKIDL 300 ASNYSYLMEE MNRLPGNSIM KHGVKCLDRA ELGRFNQNWR LLQIEEAQLS LRRNAMIHEQ 360 TKLILEAIAA ASKNGN

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MLPIALAHSP KLSHSSPPLS LSSESLSDFR LFPHHKLYSS SHNSHHHHHH HHSQPPTNFR  60
STIMSTVSAE APSSKKPKIA SGGNHRESTP ESPENINTIT NITGATPPSA TPNTDRKPRF  120
QRVFSEEDEI HLLKGFFEII QDTPNPALAA PMLYERVGKS LSGEINQTQL VEKIRKLRQK  180
YTKQVMENIM PKNPHDKEVF DISNKIWGEN PARGRRNSPK GPSNKRVRKR KSSSGGDVPK  240
GGIIVGLPSS SIPPADNNNN DNKAHVADKA NYAAEGLNGA DAAAAAAVTV AFAPAVKIDL  300
ASNYSYLMEE MNRLPGNSIM KHGVKCLDRA ELGRFNQNWR LLQIEEAQLS LRRNAMIHEQ  360
TKLILEAIAA ASKNGN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	231	KRVRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-17	GeBP family protein