PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412916.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 428aa MW: 48673.9 Da PI: 8.4217

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.4	9.9e-17	65	154	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f kv+ +s v+ ++ +p++f+ ++ ++e+++ltl e+g ++ v++ +++++ l++GW +F+ an L +gD++vF+l++ ++f +v XP_026412916.1 65 FTKVMRQSQVSGGPWMKIPRNFCYSNL--PREKVDLTLLVEDGDEFIVRF----YPRMFALSGGWDHFATANMLIAGDVLVFQLVKATKF--KVY 151 89*******************7774..56789************....9999************************987777..888 PP EE- CS B3 96 vfr 98 ++r XP_026412916.1 152 IVR 154 776 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MTKKLESPST SATDMDNSSN SVVAYPMKNK SSRTRSVNNI YRPKSLAQEQ AEEIQSSLSQ 60 RYPSFTKVMR QSQVSGGPWM KIPRNFCYSN LPREKVDLTL LVEDGDEFIV RFYPRMFALS 120 GGWDHFATAN MLIAGDVLVF QLVKATKFKV YIVRGNGSMD VDVALDPPEF PVPAKENDLE 180 DDVYIKDLMP IQLYTRKRVK SHPSAPILGD AQMCVLSLEP PPMDHNNEVV DDSEVLKGMK 240 LSDSIVEFQD VGSFRSFRIA VNGLIIDSEI TEYVRTKYYE LCCSQKAFLH KHLAPRLNSK 300 LVAGIISETV NISDAIRAST LDTPKDKFES WARGLDAFGK LGMNVGFLVS RLNKLIKLAF 360 DSEQAFEYKR YRDIMSRKNH VVEEITSLEM KVLRLKNDSR RLEKDIKCLE LDAQKHILTF 420 RKEAASPW

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MTKKLESPST SATDMDNSSN SVVAYPMKNK SSRTRSVNNI YRPKSLAQEQ AEEIQSSLSQ  60
RYPSFTKVMR QSQVSGGPWM KIPRNFCYSN LPREKVDLTL LVEDGDEFIV RFYPRMFALS  120
GGWDHFATAN MLIAGDVLVF QLVKATKFKV YIVRGNGSMD VDVALDPPEF PVPAKENDLE  180
DDVYIKDLMP IQLYTRKRVK SHPSAPILGD AQMCVLSLEP PPMDHNNEVV DDSEVLKGMK  240
LSDSIVEFQD VGSFRSFRIA VNGLIIDSEI TEYVRTKYYE LCCSQKAFLH KHLAPRLNSK  300
LVAGIISETV NISDAIRAST LDTPKDKFES WARGLDAFGK LGMNVGFLVS RLNKLIKLAF  360
DSEQAFEYKR YRDIMSRKNH VVEEITSLEM KVLRLKNDSR RLEKDIKCLE LDAQKHILTF  420
RKEAASPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	1e-26	B3 family protein