PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412799.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 304aa    MW: 34140.7 Da    PI: 9.5462
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412799.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.00012202244754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ ++R ++i +++ +L++l+ +      +K + a++L+ + ++Ik+L
  XP_026412799.1 202 QIRQKRSQKIGDKIITLQKLVSPF-----GKTDTASVLKDTADHIKML 244
                     6779*******************8.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MRNTTVYPSL YVGNNDDHQM LNSDIPLHST MPNHNSSDLQ EKNINNQVLG SFSPLSAIEI  60
PSPLNYLSLL PGLHPISDAS VSNIIASSTT TAMHRDAAAE QLYAQYLFSA HRNSLDNDGK  120
RTIVKSDIGS ATVEGSIKRT KNVVPIAMAK DDRHPQSQYF VDKRMSEPTR GKQPKAQEKW  180
LLELEKAKAK RQQLEVTQVQ SQIRQKRSQK IGDKIITLQK LVSPFGKTDT ASVLKDTADH  240
IKMLYNQIEL LTNPYFQPDA FLHHYHKQHD LQVGTGEMSN GLAERGLCLV PVSFTQNITK  300
QEKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.13e-22bHLH family protein