PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412798.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 317aa    MW: 35725.4 Da    PI: 8.9205
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412798.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.60.00012215257754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ ++R ++i +++ +L++l+ +      +K + a++L+ + ++Ik+L
  XP_026412798.1 215 QIRQKRSQKIGDKIITLQKLVSPF-----GKTDTASVLKDTADHIKML 257
                     6779*******************8.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MRNTTVYPSL YVGNNDDHQM LNSDIPLHST MPNHNSSDLQ EKNIVCEYNF FHESQLSNNQ  60
VLGSFSPLSA IEIPSPLNYL SLLPGLHPIS DASVSNIIAS STTTAMHRDA AAEQLYAQYL  120
FSAHRNSLDN DGKRTIVKSD IGSATVEGSI KRTKNVVPIA MAKDDRHPQS QYFVDKRMSE  180
PTRGKQPKAQ EKWLLELEKA KAKRQQLEVT QVQSQIRQKR SQKIGDKIIT LQKLVSPFGK  240
TDTASVLKDT ADHIKMLYNQ IELLTNPYFQ PDAFLHHYHK QHDLQVGTGE MSNGLAERGL  300
CLVPVSFTQN ITKQEKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.13e-22bHLH family protein