PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412525.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

TCP

Protein Properties

Length: 445aa MW: 49220.3 Da PI: 7.1687

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.4	1.1e-29	37	167	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ s s+ XP_026412525.1 37 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELppwhptatmptpntlnpS-----------SK 120 79**************************************************************998888755544433321...........22 PP TCP 80 ssasnsssg.....................................k 89 ss++++ ++ + XP_026412525.1 121 SSEQHQIEEdeeenqlrsrgnqneqggflgsssktsrqvggveqsgR 167 22222222211111111222222233444444444444444443332 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MGETQNRSST SRLGLLRGTG GGGEIIEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS 60 AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KSAIDELAEL PPWHPTATMP TPNTLNPSSK 120 SSEQHQIEED EEENQLRSRG NQNEQGGFLG SSSKTSRQVG GVEQSGRYMF LQNQQEQQQH 180 QQNNSFLPPS LDSDSIADTI KSFFPMATSS SSIHFQNYSS PPDLLSRTNS QTQDLRLSLQ 240 SFQDPMFHQH HHSQHQQHHH SNPSSEQQHA LFSTAFDTSG GGGSTNAWSE QQMQEMGRFQ 300 RMIAWNPNTD SSGGNGNGSG SSSGGFMFNS PPQQQQQPQP SSSQQAVQQT LFGNSPNPFF 360 SQRGPLQSSN SPSSIRAWNN TTDPSMVSDD NQHYQNLNSS IHHHQQMQQP FASGGFGFRI 420 PARIQGEEEH DVGASHKPPS SASRH

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MGETQNRSST SRLGLLRGTG GGGEIIEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KSAIDELAEL PPWHPTATMP TPNTLNPSSK  120
SSEQHQIEED EEENQLRSRG NQNEQGGFLG SSSKTSRQVG GVEQSGRYMF LQNQQEQQQH  180
QQNNSFLPPS LDSDSIADTI KSFFPMATSS SSIHFQNYSS PPDLLSRTNS QTQDLRLSLQ  240
SFQDPMFHQH HHSQHQQHHH SNPSSEQQHA LFSTAFDTSG GGGSTNAWSE QQMQEMGRFQ  300
RMIAWNPNTD SSGGNGNGSG SSSGGFMFNS PPQQQQQPQP SSSQQAVQQT LFGNSPNPFF  360
SQRGPLQSSN SPSSIRAWNN TTDPSMVSDD NQHYQNLNSS IHHHQQMQQP FASGGFGFRI  420
PARIQGEEEH DVGASHKPPS SASRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	6e-88	TCP family protein