PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412492.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 721aa    MW: 78487.6 Da    PI: 6.3079
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.54.7e-08304324526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                     +C++f++ G C++Gd C +aHg
  XP_026412492.1 304 PCPDFRK-GACRRGDLCEYAHG 324
                     8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MCGGPDSTQS KSSSISPTSS EETKLPTKSM NQLTIDTEES NLLELAANND LDGFKRLIER  60
DASTVDQIGL WYGRQKGSKQ MVLEHRTPLM VAATYGNVDV LKFILSFSEA DVNRSCGPDK  120
STALHCAASG GSINADEVVN LLLLSGANAS SVDANGCRPA DVIVVSPKLP NLKASLETLL  180
SINGSDVSAT ERNLRVSTIC LSSSPSSPEN GSSSSVSDLP DSPTMNVDDL HVSANLEKRE  240
YPIDPSLPDI KNSIYSTDEF RMFSFKIRPC SRAYSHDWTE CPFVHPGENA RRRDPRKFHY  300
SCVPCPDFRK GACRRGDLCE YAHGVFECWL HPAQYRTRLC KDGTSCTRRV CFFAHTSEEL  360
RPLYMSTGSA VPSPRSSAVA MDMAAAMNLY PASPSSVSTM SSSPFASPMS PSGNNISHSS  420
LAWPQPNVPA LHLPGCNLQS SRLRSSFNAR DIPPEEYSML QEQQQLLSEL SCFSQQQRLN  480
SPSLNSPIRT KTLTSSNLEE LFAAEITRSP RYADRVTSSG GFSPSHKSAV FSQFQQQQSM  540
LSPINTNVFS PKNVDQSMLQ ASYASPGRMS PRSMEPISPG SARLPVFSQR DKHQQQQQLR  600
SLSARDLGSN SSAVVGSPVN PWSKWGSPNG KLDWGVQGDE LGHLQRSNSL EPGHNGVEEP  660
DLSWVHSLVK ESPPEIKGNV MPTSPPASSG EGTNSNLQNE SVDNSVLGAW LEQMQLDQLV  720
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein