PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026412455.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | TCP | ||||||||
Protein Properties | Length: 214aa MW: 23312.7 Da PI: 7.4544 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 110 | 3.5e-34 | 31 | 139 | 3 | 89 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 ++ + + ++hTkv+gR+RRvR++a caar+F+L++eLG+++d++tieWLl a+ +i+++tgt++++as +e+ s+s+ +s++ s+ XP_026412455.1 31 KRSSASRDRHTKVNGRGRRVRVPAICAARIFQLTRELGHKSDGETIEWLLHHAESSIIAATGTGTIAASISETCSESNRTSHQLSNggnnflndv 125 5677789*************************************************************888777777777766666556666665 PP TCP 89 .............k 89 + XP_026412455.1 126 qhkfdsssaassqQ 139 54443333333330 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MSSDLVLQHQ EEALSILQQQ SATPVKKTLA KRSSASRDRH TKVNGRGRRV RVPAICAARI 60 FQLTRELGHK SDGETIEWLL HHAESSIIAA TGTGTIAASI SETCSESNRT SHQLSNGGNN 120 FLNDVQHKFD SSSAASSQQS MFRLYLCQPV GLEYSVAGSG AANGGGGCGG GYNNRHMPFT 180 AMLFQPSSAE NSEDHHQQHQ LHQDKQHQQV LEEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47620.1 | 2e-27 | TCP family protein |