PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026412225.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 476aa MW: 52178.9 Da PI: 8.983

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026412225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.3e-05	70	90	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_026412225.1 70 CEICGKGFQRDQNLQLHRRGH 90 *******************88 PP
2	zf-C2H2	12.4	0.00047	144	166	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_026412225.1 144 WKCEKCSKRYAVQSDQKAHAKTC 166 58******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MLMINKMATG EPIMGSVFNQ QNPADFVVGS INNPLPNIKK KRNLPGTPDP EAEVIALSPK 60 TLMATNRFLC EICGKGFQRD QNLQLHRRGH NLPWKLRQRS SKEPKKRVYV CPEKGCVHNH 120 PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KRYAVQSDQK AHAKTCGTRE YKCDCGTLFS 180 RRDSFLTHRA FCDALAEETA RVTAANINHS IGNNNGCINY QFVGSSLGPN MVQHFSSIFK 240 PIPTNDEELS NKHNTPGLSL WMGQGSQVNP IGNTTTIQEL HQMGSSNSGT LYGDPFSCSN 300 AHQQSDYQLD WVLGRKLSST SSGELLTSIK EDGSPQLLSA PSLYSTQHQQ QPSMANMSAT 360 ALLQKAAQLG ATTATNPSVL MSFGVKSSDD HNQDVSKFNG FCFGSNLSTN TNLGSLAETP 420 LLDLSTTSIN QFEMYTPAAK RRKLEDAEGG QTRDFLGVGV KTTTAAICPS SINGWT

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MLMINKMATG EPIMGSVFNQ QNPADFVVGS INNPLPNIKK KRNLPGTPDP EAEVIALSPK  60
TLMATNRFLC EICGKGFQRD QNLQLHRRGH NLPWKLRQRS SKEPKKRVYV CPEKGCVHNH  120
PSRALGDLTG IKKHFCRKHG EKKWKCEKCS KRYAVQSDQK AHAKTCGTRE YKCDCGTLFS  180
RRDSFLTHRA FCDALAEETA RVTAANINHS IGNNNGCINY QFVGSSLGPN MVQHFSSIFK  240
PIPTNDEELS NKHNTPGLSL WMGQGSQVNP IGNTTTIQEL HQMGSSNSGT LYGDPFSCSN  300
AHQQSDYQLD WVLGRKLSST SSGELLTSIK EDGSPQLLSA PSLYSTQHQQ QPSMANMSAT  360
ALLQKAAQLG ATTATNPSVL MSFGVKSSDD HNQDVSKFNG FCFGSNLSTN TNLGSLAETP  420
LLDLSTTSIN QFEMYTPAAK RRKLEDAEGG QTRDFLGVGV KTTTAAICPS SINGWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-132	C2H2 family protein