PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026412004.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 377aa    MW: 42813.3 Da    PI: 7.218
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026412004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.32.3e-07131151526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f+r G C +Gd+C F+Hg
  XP_026412004.1 131 ACSDFRR-GNCLRGDSCEFSHG 151
                     6******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSSSMYAAEN NHYKKLLGHH QGGIADLPPR KQLLTRRSSN LMIPNISFDD HDDDHFETVL  60
LNFPHKFLPC NNTSDDDEND PYASDEFRIY EFKIRRCMRS RSHDWTDCPF AHPGEKARRR  120
DPRRYHYSGN ACSDFRRGNC LRGDSCEFSH GVFECWLHPT RYRTQVCKDG RNCKRKVCFF  180
AHTPKQLRVL VPPRDSPRTK PHHHLCNCVY SHSSSSSPVS SSSPTSTLMG FSHLSLSPPL  240
SPTISPSSSS ELTPKQQQSL LGMLSYKSKL MELVNSLEAM DLSCINNDSP TAAAMINDNN  300
FSWSGGNNNI SSSSPNYENQ EQFFMSPNST TTESPRNNSG FKQRDYYNFS NNEDYGNGES  360
SSSSCPPDLD WVNELVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.15e-67C3H family protein