PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026411936.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 243aa MW: 28119.3 Da PI: 7.3899 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.5 | 2e-17 | 80 | 130 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ +q+e Le+ F+++ ++ e++ +LA++lgL+ r+V vWFqNrRa++k XP_026411936.1 80 RMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRRARWK 130 56679*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 109.2 | 2.9e-35 | 76 | 167 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+ +q+++LE+sF+ee kLeperK +la+eLglqpr+vavWFqnrRAR+k+k+lE+ y++Lk+++d++++e+ +L++ev +L+ +l+ XP_026411936.1 76 ERKRRMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRRARWKAKNLERLYDSLKQEFDTVSREKLKLQEEVMKLKMKLD 167 69**************************************************************************************9886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 243 aa Download sequence |
MAWNETVKPL MASGVGGEHT VAFLYDYNYH PFPGGHHQAG EVERTHLSNN NNHNSNSNSN 60 SSNNNSAHDE NNNHAERKRR MRWDQIESLE RSFQEEIKLE PERKIKLAQE LGLQPRKVAV 120 WFQNRRARWK AKNLERLYDS LKQEFDTVSR EKLKLQEEVM KLKMKLDRQA QMIQGSRGSK 180 DVLMEPEETV ESKSVVISNS STMLQGATYH QTAGDCNYTF NLDDYIQGSL PYMGILHGYP 240 NTY |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 77 | 106 | RKRRMRWDQIESLERSFQEEIKLEPERKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03790.1 | 7e-41 | HD-ZIP family protein |