PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026411847.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 501aa MW: 55043.3 Da PI: 7.8638

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026411847.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.4e-17	214	263	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026411847.1 214 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 263 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MMFDLNVRIT EEVMDCDSEQ VFKVKQQGGC SGKVQQVVID DSSGTSNSSS VVNAETAYSS 60 NGAEEDSCST HNNHDHLSGR NGNGNEILAL DFGILKKDVD VIVNRVETGD SRDDDLAGNL 120 SLLQSSFVTK KLFPVSHGDS NGFNLFLPNS ESSIQSHWMD LSSHHRGTVV GAASGGNHHK 180 QEVVMKVIHP PPPQQQQQQP QVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY 240 LGGFDTAHAA ARAYDRAAIK FRGVEADINF NLSDYDEDMK QMNNLTKEEF VHILRRHSTG 300 FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK AYDKAAIKCN GREAVTNFEP STYAGEINPK 360 IDEGGTNYNL DLNLGMSTPS SADGRRCGSN MIGYFPFSTH DAKRARMENP VAAALCVQTP 420 NGQVMSSEHP AFWTGIPPSF FVNYEGGTIG RRVDVDLPRL ASQSMQLHGS FVPTATMPLF 480 AAAASSGFSS SATIPPNTNR I

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MMFDLNVRIT EEVMDCDSEQ VFKVKQQGGC SGKVQQVVID DSSGTSNSSS VVNAETAYSS  60
NGAEEDSCST HNNHDHLSGR NGNGNEILAL DFGILKKDVD VIVNRVETGD SRDDDLAGNL  120
SLLQSSFVTK KLFPVSHGDS NGFNLFLPNS ESSIQSHWMD LSSHHRGTVV GAASGGNHHK  180
QEVVMKVIHP PPPQQQQQQP QVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY  240
LGGFDTAHAA ARAYDRAAIK FRGVEADINF NLSDYDEDMK QMNNLTKEEF VHILRRHSTG  300
FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK AYDKAAIKCN GREAVTNFEP STYAGEINPK  360
IDEGGTNYNL DLNLGMSTPS SADGRRCGSN MIGYFPFSTH DAKRARMENP VAAALCVQTP  420
NGQVMSSEHP AFWTGIPPSF FVNYEGGTIG RRVDVDLPRL ASQSMQLHGS FVPTATMPLF  480
AAAASSGFSS SATIPPNTNR I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.2	2e-90	AP2 family protein