PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410626.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 398aa MW: 46087.5 Da PI: 7.0979

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.6	1.7e-17	50	136	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 ++Yn+YA+ vGF +r+++++++ ++++i +r +v s++g+ +++ + + ++ + rt C+akl++k+ + d+k+ + +++++HnH l XP_026410626.1 50 EYYNRYARGVGFGIRRDSTTHR-KDKTISRRALVFSNQGNYRKHIRG--SPMKRCLHARTVCEAKLVIKLVSdDSKYSIVEFVEKHNHVL 136 69*************98887.7777*********9999988..88889999**********99*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MVIIETHSMH EDIDDFLMEK DVPMSEGLKG ANEEVPKIGM EFDSEERAYE YYNRYARGVG 60 FGIRRDSTTH RKDKTISRRA LVFSNQGNYR KHIRGSPMKR CLHARTVCEA KLVIKLVSDD 120 SKYSIVEFVE KHNHVLTCPG QVHLLRSQRN IETAQARLIE NMRDAGISQK NIFVYFSVES 180 GGSQILNFTQ MDCNNHIQRR RRQDVLKKGD VEHLLEYFLE KQKDNPYFFY AIEMDEPGQL 240 CNYFWTDAKC MMDYSFFGDV LIFDTTFGTN GYDKPFAPFV GKNNHGPTTL FGCALLLDGS 300 TDSFVLLFKT FLNAMNGKHP QTIFTDQATP IMNAINLVFP NTHHRLCLCH IFELAAKHLS 360 HVFASSEFFS KDFKKCIYEN ETKDEFESMW KSCFKNTS

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MVIIETHSMH EDIDDFLMEK DVPMSEGLKG ANEEVPKIGM EFDSEERAYE YYNRYARGVG  60
FGIRRDSTTH RKDKTISRRA LVFSNQGNYR KHIRGSPMKR CLHARTVCEA KLVIKLVSDD  120
SKYSIVEFVE KHNHVLTCPG QVHLLRSQRN IETAQARLIE NMRDAGISQK NIFVYFSVES  180
GGSQILNFTQ MDCNNHIQRR RRQDVLKKGD VEHLLEYFLE KQKDNPYFFY AIEMDEPGQL  240
CNYFWTDAKC MMDYSFFGDV LIFDTTFGTN GYDKPFAPFV GKNNHGPTTL FGCALLLDGS  300
TDSFVLLFKT FLNAMNGKHP QTIFTDQATP IMNAINLVFP NTHHRLCLCH IFELAAKHLS  360
HVFASSEFFS KDFKKCIYEN ETKDEFESMW KSCFKNTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-73	FAR1 family protein