PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026410161.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 517aa MW: 57187.2 Da PI: 6.0482

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026410161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.9	2.3e-05	401	438	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L XP_026410161.1 401 RKEKLGDRITALQQLVSPF-----GKTDTASVLFEAIEYIKFL 438 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MAEEFQQSGI CSGNLWNSDR INGSNSLPFS TGTNDVGFNS YVGSWRHNNT TTDHHHHHYP 60 ISSLEMNKTR SSTDESGGTS LSGSSSIVYQ DIQKPQESDS VGHEGGGNSS DSILMDSTLQ 120 MMGFSLSSSS VPSLDWNNQN YLSNNNRSRN GRADEGDDDQ VLKDWSNDLK SFNSCGGSGG 180 EDSSSTITSL KQINNGFALD EQQQQPQSSD CTVTCEGLPT SFPINSSTLY GCPTTLLQGL 240 FEPDHNLPPP SGASYPDENR TMDFNNPSLT NYIMNSSNDL SSNNTTWQKF SHQFLKTTTS 300 PPQLQPTSNN QSLYFSNDAP FWNASAASMT NDRSSFLPSS QQIQLLTSSF EENKPYPSNH 360 TVKPKKSEEV RDSSSALKKS NNEPSFKRPR IETPLPTFKV RKEKLGDRIT ALQQLVSPFG 420 KTDTASVLFE AIEYIKFLHD QVSVLSAPYL KNCSAHIQHH HKNSNKSRDH NGQGNRNYHQ 480 QDLRSRGLCL VPISSTFPVT NETATDFWTP TFGGTYR

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MAEEFQQSGI CSGNLWNSDR INGSNSLPFS TGTNDVGFNS YVGSWRHNNT TTDHHHHHYP  60
ISSLEMNKTR SSTDESGGTS LSGSSSIVYQ DIQKPQESDS VGHEGGGNSS DSILMDSTLQ  120
MMGFSLSSSS VPSLDWNNQN YLSNNNRSRN GRADEGDDDQ VLKDWSNDLK SFNSCGGSGG  180
EDSSSTITSL KQINNGFALD EQQQQPQSSD CTVTCEGLPT SFPINSSTLY GCPTTLLQGL  240
FEPDHNLPPP SGASYPDENR TMDFNNPSLT NYIMNSSNDL SSNNTTWQKF SHQFLKTTTS  300
PPQLQPTSNN QSLYFSNDAP FWNASAASMT NDRSSFLPSS QQIQLLTSSF EENKPYPSNH  360
TVKPKKSEEV RDSSSALKKS NNEPSFKRPR IETPLPTFKV RKEKLGDRIT ALQQLVSPFG  420
KTDTASVLFE AIEYIKFLHD QVSVLSAPYL KNCSAHIQHH HKNSNKSRDH NGQGNRNYHQ  480
QDLRSRGLCL VPISSTFPVT NETATDFWTP TFGGTYR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	9e-54	bHLH family protein